Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0967 ATGAAGCATGAGAGTGAAAAACCTCAAAAAGGTGAAAAAATGAAAAGAGAGAAACCATACCTTATGAAGAAGATGCCATGGTCACCAAGAAGAGAAGCACCGATAGTAGTGAGGTTCGTTGTGATTGCCTTATTCATCATGATAACAGTACCAACACCACCAACAGCAGCAGATGCAGAAGCAGAAGCAGCAACAACAACTTCTGATGCAGTTTTATTGATACAGTTCAAGCATTTACACGTTTCCTCTGATCCCTACAGCTTCCTCTCCGACTGGGACCCACACGCGCCATCCCCGTGCGCGTGGCGAGGTATCACCTGCTCCTCCTCCGGCGGCGTCAGCGCCATCGACCTCAGCGGCGCTGCCCTCTCCGGCACACTGCACCTCCCCACACTCACGTCACTTTCATCGCTCCAAAACCTAATCCTACGTGGCAACTCCTTCTCCTCTTTCAACCTCACCGTTTCGCCACTTTGTACGCTCGAAACACTCGACCTCTCTCACAACAACTTCTCCGGCAAGTTTCCTTTCGCAAACCTCGCTCCATGTATCCGCCTTAGCTATCTCAACCTCTCTAATAATCTCATCACCGCTGGGCCTGGGCCCTGGCCCGAGCTGGCCCAACTTGATTTGTCTAGAAACCGTGTCTCCGACGTGGACCTTCTCGTTTCCGCTCTCGGAAGCTCAACTCTCGTTTTTCTTAACTTCTCGGACAATAAACTCGCGGGTCAACTCAGCGAAACGCTCGTTTCGAAGAGCCTGAATCTCTCCACTTTGGACCTCTCTTATAATCTTTTCTCCGGAAAGGTTCCGCCGAGGCTTCTAAACGACGCCGTTCAGGTCCTGGATTTCTCGTTCAACAATTTCTCGGAATTTGACTTCGGTTTCGGTTCGTGTGAGAATCTAGTTCGGTTGAGTTTCTCGCACAATGCAATCTCTTCAAACGAGTTTCCGCGCGGGTTGGGTAACTGCAACAATCTTGAGGTTCTAGATCTTTCTCACAATGAGCTCATGATGGAGATTCCGTCGGAAATTCTTCTGAATTTGAAGAGTTTGAAGTCTCTGTTTCTCGCACACAACAAATTTTCCGGCGAAATCCCGAGTGAGCTTGGAAGCCTTTGCAAAACTCTAGTTGAACTTGATCTCTCGGAGAACAATCTTTCTGGTTCGTTGCCTTTGAGTTTCACTCAATGTTCTTCTCTGCAGAGTCTGAATCTCGCGAGAAACTATTTTTCTGGGAACTTCCTTGTTTCCGTGGTGAACAAGCTTCGGAGTCTAAAGTATCTAAACGCAGCGTTTAACAACATAACGGGACCGGTTCCGGTGTCGCTTGTGAGCTTGAAAGAGCTTCGGGTTCTTGACCTGAGCTCGAACCGGTTCAGCGGCAATGTTCCGTCGTCTTTATGTCCTTCCGGGTTGGAGAATTTGATCCTCGCTGGCAATTACCTTTCAGGGACGGTACCGTCACAGCTCGGTGAGTGTAGGAACTTGAAAACTATTGATTTCAGCTTTAACAGTTTGAACGGTTCCATACCGTGGAAGGTGTGGGCTTTGCCTAATTTAACTGATTTGATTATGTGGGCTAATAAACTCACTGGAGAAATCCCCGAGGGAATTTGTGTTAAGGGAGGGAACTTGGAGACGTTGATTTTGAACAACAATTTAATTTCTGGGTCCATTCCGAAGTCAATTGCGAATTGCACCAACATGATATGGGTGTCGTTGGCGAGCAACCGGTTAACCGGGGAGATAACGGCTGGGATTGGGAATTTGAATGCATTGGCGATTCTTCAGCTGGGGAATAACTCGCTCAGTGGGAGGATTCCGCCGGAGATAGGCGAGTGCAAGAGGTTGATATGGTTGGATTTGAATAGCAATAACCTAACCGGGGATATCCCTTTCCAGCTTGCTGATCAGGCAGGGTTGGTTATCCCAGGTAGGGTTTCGGGGAAGCAGTTTGCGTTTGTGAGGAATGAGGGTGGGACTAGTTGCAGGGGTGCTGGTGGGTTGGTTGAGTTTGAGGATATCAGGACAGAGAGGCTTGAAGGTTTTCCAATGGTGCATTCATGCCCGTTGACACGGATTTACTCCGGTTGGACTGTGTATACTTTTGCTTCCAATGGGAGTATGATCTACCTTGACCTTTCCTACAACTTGTTGTCTGGTAGCATCCCTGAGAATTTGGGTGAGATGGCCTATTTGCAGGTGCTGAATTTGGGGCACAATAGGTTGAGTGGGAACATTCCTGATAGGCTTGGTGGTTTGAAAGCAATAGGGGTGCTTGATCTGTCTCATAATAGTCTTAATGGGTCCATCCCTGGGGCATTGGAGGGTCTTTCTTTTCTCAGTGACCTTGATGTGTCTAATAATAATCTCACTGGGTCCATTCCTTCTGGAGGTCAGTTAACTACTTTTCCAGCTGCCAGATATGAGAACAACTCTGGCCTTTGTGGGGTGCCTTTGTCAGCGTGTGGGACTTCAAAGAATCACTCCGTTGCTGTTGGGGGTTGGAAGAAGAAGCAGCCTGCTGCAGCTGGGGTTGTCATTGGTTTGCTTTGCTTCCTCGTGTTTGCACTTGGGCTTGTGTTGGCTTTGTACCGAGTGAGGAAGACACAGAGGAAGGAGGAGATGAGGGAAAAGTATATAGAGAGTCTTCCAACTTCTGGGGGCAGTAGTTGGAAGCTATCCAGCTTTCCTGAGCCTTTGAGCATCAATGTTGCCACCTTTGAGAAGCCTCTGCGGAAGCTGACGTTTGCGCATCTTCTTGAGGCTACTAATGGTTTCAGTGCCGAGAGTTTGATAGGTTCTGGGGGGTTTGGTGAGGTGTACAAAGCTAAGCTAAAAGATGGTTGTGTTGTTGCTATCAAGAAGCTCATTCACGTGACGGGTCAGGGAGATAGGGAGTTCATGGCTGAGATGGAAACTATTGGGAAGATTAAGCATAGGAACCTGGTTCAGCTGCTGGGTTACTGTAAAGTTGGAGAGGAGAGGCTGCTTGTGTATGAGTACATGAGATGGGGAAGTCTCGAGGCTGTTTTACATGAGAGAGCAAAAGGAGGAGGTTCAAAGCTTGATTGGGCAGCAAGGAAGAAGATTGCCATAGGGTCAGCAAGAGGTCTCGCATTTCTTCACCATAGTTGCATTCCTCACATTATACACAGGGACATGAAGTCCAGCAATATTCTTCTTGATGAAAATTTTGAGGCCAGAGTTTCTGATTTTGGCATGGCGAGATTGGTTAATGCCCTCGACACTCATCTCACTGTTAGCACACTTGCCGGAACACCTGGTTATGTACCCCCTGAGTACTACCAGAGTTTTAGATGTACAGCAAAAGGGGATGTCTATAGCTATGGTGTCATACTGCTAGAGCTTCTATCAGGGAAGAGACCAATTGACTCTTCTGAGTTTGGTGATGATAGCAATCTTGTTGGATGGTCAAAGATGCTTTACAAAGAGAAAAGAATTAATGAAATACTTGATCCTGATTTAATTGTGCAAACATCTAGTGAAAGTGAACTATTACAATATTTGAGAATTGCTTTTGAATGTCTGGATGAGAGACCATACCGGCGGCCAACCATGATACAAGTGATGGCTATGTTTAAAGAGCTTCAGGTTGACACATTTAATGATATGCTTGATAGCTTCTCTCTGAGAGACAATGTTATTGATGAAGCATGAGAAGAGGATCTTTACTATAAGACTCAAAGCCCTTTGACAGTTAAGGAAATAAAAAGGTTCTCAACATTTGGCATGTTGCTGGACTAA 3771 0.4673 MKHESEKPQKGEKMKREKPYLMKKMPWSPRREAPIVVRFVVIALFIMITVPTPPTAADAEAEAATTTSDAVLLIQFKHLHVSSDPYSFLSDWDPHAPSPCAWRGITCSSSGGVSAIDLSGAALSGTLHLPTLTSLSSLQNLILRGNSFSSFNLTVSPLCTLETLDLSHNNFSGKFPFANLAPCIRLSYLNLSNNLITAGPGPWPELAQLDLSRNRVSDVDLLVSALGSSTLVFLNFSDNKLAGQLSETLVSKSLNLSTLDLSYNLFSGKVPPRLLNDAVQVLDFSFNNFSEFDFGFGSCENLVRLSFSHNAISSNEFPRGLGNCNNLEVLDLSHNELMMEIPSEILLNLKSLKSLFLAHNKFSGEIPSELGSLCKTLVELDLSENNLSGSLPLSFTQCSSLQSLNLARNYFSGNFLVSVVNKLRSLKYLNAAFNNITGPVPVSLVSLKELRVLDLSSNRFSGNVPSSLCPSGLENLILAGNYLSGTVPSQLGECRNLKTIDFSFNSLNGSIPWKVWALPNLTDLIMWANKLTGEIPEGICVKGGNLETLILNNNLISGSIPKSIANCTNMIWVSLASNRLTGEITAGIGNLNALAILQLGNNSLSGRIPPEIGECKRLIWLDLNSNNLTGDIPFQLADQAGLVIPGRVSGKQFAFVRNEGGTSCRGAGGLVEFEDIRTERLEGFPMVHSCPLTRIYSGWTVYTFASNGSMIYLDLSYNLLSGSIPENLGEMAYLQVLNLGHNRLSGNIPDRLGGLKAIGVLDLSHNSLNGSIPGALEGLSFLSDLDVSNNNLTGSIPSGGQLTTFPAARYENNSGLCGVPLSACGTSKNHSVAVGGWKKKQPAAAGVVIGLLCFLVFALGLVLALYRVRKTQRKEEMREKYIESLPTSGGSSWKLSSFPEPLSINVATFEKPLRKLTFAHLLEATNGFSAESLIGSGGFGEVYKAKLKDGCVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVQLLGYCKVGEERLLVYEYMRWGSLEAVLHERAKGGGSKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNILLDENFEARVSDFGMARLVNALDTHLTVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKRPIDSSEFGDDSNLVGWSKMLYKEKRINEILDPDLIVQTSSESELLQYLRIAFECLDERPYRRPTMIQVMAMFKELQVDTFNDMLDSFSLRDNVIDEA*EEDLYYKTQSPLTVKEIKRFSTFGMLLD* 1257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0967 1255 Gene3D Transferase(Phosphotransferase) domain 1 1004 1222 - -
Gso4g0967 1255 Gene3D Ribonuclease Inhibitor 69 183 IPR032675 -
Gso4g0967 1255 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1051 1063 IPR008271 GO:0004672|GO:0006468
Gso4g0967 1255 SUPERFAMILY Protein kinase-like (PK-like) 909 1202 IPR011009 -
Gso4g0967 1255 Pfam Leucine Rich repeat 159 173 IPR001611 GO:0005515
Gso4g0967 1255 Pfam Brassinosteroid receptor island domain 641 704 IPR045381 -
Gso4g0967 1255 PRINTS Leucine-rich repeat signature 447 460 - -
Gso4g0967 1255 PRINTS Leucine-rich repeat signature 377 390 - -
Gso4g0967 1255 SUPERFAMILY L domain-like 474 823 - -
Gso4g0967 1255 Gene3D Ribonuclease Inhibitor 205 825 IPR032675 -
Gso4g0967 1255 SUPERFAMILY L domain-like 279 536 - -
Gso4g0967 1255 Pfam Leucine rich repeat N-terminal domain 68 108 IPR013210 -
Gso4g0967 1255 ProSiteProfiles Protein kinase domain profile. 928 1211 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g0967 1255 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 44 1213 - -
Gso4g0967 1255 SMART serkin_6 928 1202 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g0967 1255 Pfam Protein kinase domain 930 1200 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g0967 1255 ProSiteProfiles Leucine-rich repeat profile. 326 348 IPR001611 GO:0005515
Gso4g0967 1255 SUPERFAMILY L domain-like 65 342 - -
Gso4g0967 1255 SMART LRR_typ_2 324 348 IPR003591 -
Gso4g0967 1255 SMART LRR_typ_2 755 778 IPR003591 -
Gso4g0967 1255 SMART LRR_typ_2 135 158 IPR003591 -
Gso4g0967 1255 SMART LRR_typ_2 591 615 IPR003591 -
Gso4g0967 1255 SMART LRR_typ_2 518 542 IPR003591 -
Gso4g0967 1255 SMART LRR_typ_2 779 802 IPR003591 -
Gso4g0967 1255 SMART LRR_typ_2 447 475 IPR003591 -
Gso4g0967 1255 SMART LRR_typ_2 731 754 IPR003591 -
Gso4g0967 1255 SMART LRR_typ_2 349 373 IPR003591 -
Gso4g0967 1255 ProSitePatterns Protein kinases ATP-binding region signature. 934 957 IPR017441 GO:0005524
Gso4g0967 1255 Pfam Leucine rich repeat 734 792 IPR001611 GO:0005515
Gso4g0967 1255 Gene3D - 648 705 - -
Gso4g0967 1255 Gene3D Phosphorylase Kinase; domain 1 892 1003 - -
Gso4g0967 1255 PANTHER SERINE/THREONINE-PROTEIN KINASE BRI1-LIKE 1 44 1213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0967 Gso-Chr4 12446020 12450314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0967 68 1230 Receptor kinase-like Gene Family AT1G55610 63.167 0.0 1447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Gso4g0967 Pkinase 1.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0967 - - gsj:114409366 2407.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0967 4 12446020 12450314 Gso6g2640 6 48204953 48209504 GST