Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0944 ATGGATACCTCTGGTAATACATGTGAGATAGTGGAATCAAGGGAAGAGATAATTTCTGAATTCAAAATGGATGAAAAGCCTGAGAGTAGTTGTGCTCACAAATCAGGAAAGAAGTATTCGATTGAGGATGATATTAATCAGCTTTTTCAGGCTATTGAAATTAAAAGCTCATCTAGAAGTCGTAGTTCATCACGTTTACAAAAGAGTGCTCTTAAAAGGCCAATAAAAGTTACTTCATCTCAGGCATCAGGAATTGGCATCTCAGAGCCTGTAAGTTTAAAGCAGGCACTTAGAGGGTTGTGCATCTCTCAGGCCTCAGAAATGGCTGCTTTGAAGAGACTGACTAAGCCATGCAGTTCATCTAGAGTATCAGAGGCGGGCACCATCAAAAGGTTGTACACGGCAGTGGTAGATGAGGGGAAAGGGAACTTGGTTGAAATTTCTCTTGTGCCAGAGATATCTGCACCTTCTGATAAATTGTCCGGTGTAACTATATCAAGTTCAAGTGATAATCATGCTAGTCCTTTGGTTGATGCGACAAAACCAAAAGAAATGATAACTGGGTTTGCATCCCAATATCAGATTGTTCCTCTACCATTAGAGGTTGAGGGTGAGGAATTAATCACGGGAACTGGAAAACCAATACTTGCAAATTTGTCACCAGTTGCCTCTGCAAGTGAAGAAGTGCCAGAGGCCAGAATGCATCATGCTTCCTCAAGCAAAGCTTCTCTTGGTTCTTCATTGCCAGATAAGGGGCATGAAGCAAATTTACCTTCTGCATCTTGTCCTCCTAGCTCTAGCACTGGTAATGGAGCGGATAAATCCACAAGCAGTAATACATGTTTGTCAAAGCCAATATTCAATAACTTGAACTTCCTTAAGAAAAAAGTAAAGCAAGATTTAAGTTCTGCCTCTAGTTGCTCTACTCCTTGTACAAGTAATTTGGACAAGGAGGGTGGCAATTCTGATTTGAAGCATGATGTGAAAGACAATGAGAAACAGTCGCCTAGCAGTTCAAATCATAGCATTGAAGTTAACTCAATTAATGGTGGTACAGATTCAAGCAAATCTGGTTTCAGCTTGAATTGCAATAAGAGAACTAAGTTTCTGGTGACAAAAGTTGATGAGAAATCAAGATCAAAGGAAAAGGGCGAGTACTCTCAAAGCTCAAAAAGTAGCATTGGTGAATATAGTAGTAGCACAAGCATCAGTGAGGAAAGCAGTCTAAGTGGTTCCAGTCGCGGTGGCCACAGGCCTCACATGTCAAAACACTTGAGATGGGAAGCTGTTCGTGCTGTTCAGCAGCAACATGGTAGTTTAAATTTGAAGCACTTTAAGCTGCTAAGGAGGCTTGGTAGTGGGGACATTGGAACTGTTTATCTTGCAGAACTAATTGGTACCAGCTGCCTTTTTGCACTCAAAGTGATGGACAGTGAATTTTTGGCAAGTCGGAAGAAAATGTTCAGGGCCCAAACTGAAAGAGAGATCCTTCAGATGCTGGACCATCCATTTCTTCCTACACTTTATTCCCATATTGCAACAGATAAGCTCTCTTGCTTGGTTATGGAGTATTGTCCAGGCGGAGATCTGCATGTGCTGCGACAGAGGCAACCATACAAGAGTTTCTCGGAACAAGCAACTAGGTTTTATGTTGCTGAGGTTCTTCTTGCCCTGGAGTATTTGCACATGCTGGGAGTTGTATATCGAGACCTAAAGCCAGAAAATATCCTAGTACGAGAAGATGGACACATTATGCTGACAGATTTTGACTTGTCACTCAGGTGTTCTGTCAATCCAATGTTAGTCAAGTCATCTTCACCTGACACAGAGAAAACATCCAGTCCCTGTTCTGAGGCTAGTTGCATACACCCTTTCTGTCTCCAACCAGATTGGCAAGTTTCCTGCTTTACTCCCATTCTGTTATCTGCCGGAATGAAATCTCGGAAGATGAAGGCTGACATAGCTTCTCATGTTGGTCCTCTGCCACAGCTTGTGGTGGAGCCTACCAGTGCACGGTCTAACTCCTTTGTTGGAACCTATGAATATCTTGCTCCGGAGATCATCAAAGGTGAGGGTCATGGGAGTGCTGTAGATTGGTGGACTTTTGGTATATTTTTGTTTGAGCTTTTATATGGTAAGACTCCCTTCAAGGGCCAATCAAATGAGGACACATTAGCCAATGTTGTTTCACAAAGCCTTAAGTTCCCGGGTACTCCAATAGTCAGTTTCCATGCAAGAGATTTGATCAGAGGATTGCTGATAAAGGATCCTGAAAATCGATTAGGTTCTGTAAAAGGTGCTGCTGAAATAAAGCAGCACCCTTTCTTTGAAGGCCTCAACTGGGCTCTAATACGGTGTGCAGCTCCACCAGAACTCCCCAAGTTCCGGGATTTTGGAAGTACAGCGCCATCTGTGGCTGCAAATAAGGAGAATGCAAATGATTTAGAGGATATAGAAGACTGTGAAGAGTTTGAGCTGTTTTAG 2484 0.4255 MDTSGNTCEIVESREEIISEFKMDEKPESSCAHKSGKKYSIEDDINQLFQAIEIKSSSRSRSSSRLQKSALKRPIKVTSSQASGIGISEPVSLKQALRGLCISQASEMAALKRLTKPCSSSRVSEAGTIKRLYTAVVDEGKGNLVEISLVPEISAPSDKLSGVTISSSSDNHASPLVDATKPKEMITGFASQYQIVPLPLEVEGEELITGTGKPILANLSPVASASEEVPEARMHHASSSKASLGSSLPDKGHEANLPSASCPPSSSTGNGADKSTSSNTCLSKPIFNNLNFLKKKVKQDLSSASSCSTPCTSNLDKEGGNSDLKHDVKDNEKQSPSSSNHSIEVNSINGGTDSSKSGFSLNCNKRTKFLVTKVDEKSRSKEKGEYSQSSKSSIGEYSSSTSISEESSLSGSSRGGHRPHMSKHLRWEAVRAVQQQHGSLNLKHFKLLRRLGSGDIGTVYLAELIGTSCLFALKVMDSEFLASRKKMFRAQTEREILQMLDHPFLPTLYSHIATDKLSCLVMEYCPGGDLHVLRQRQPYKSFSEQATRFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCSVNPMLVKSSSPDTEKTSSPCSEASCIHPFCLQPDWQVSCFTPILLSAGMKSRKMKADIASHVGPLPQLVVEPTSARSNSFVGTYEYLAPEIIKGEGHGSAVDWWTFGIFLFELLYGKTPFKGQSNEDTLANVVSQSLKFPGTPIVSFHARDLIRGLLIKDPENRLGSVKGAAEIKQHPFFEGLNWALIRCAAPPELPKFRDFGSTAPSVAANKENANDLEDIEDCEEFELF* 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0944 827 MobiDBLite consensus disorder prediction 319 334 - -
Gso4g0944 827 SUPERFAMILY Protein kinase-like (PK-like) 420 795 IPR011009 -
Gso4g0944 827 MobiDBLite consensus disorder prediction 304 318 - -
Gso4g0944 827 MobiDBLite consensus disorder prediction 374 421 - -
Gso4g0944 827 MobiDBLite consensus disorder prediction 304 359 - -
Gso4g0944 827 SMART serkin_6 445 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g0944 827 Pfam Protein kinase domain 446 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g0944 827 Pfam Protein kinase domain 673 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g0944 827 CDD STKc_phototropin_like 443 799 - -
Gso4g0944 827 PANTHER FLIPPASE KINASE 1-RELATED 1 826 - -
Gso4g0944 827 Gene3D Phosphorylase Kinase; domain 1 445 795 - -
Gso4g0944 827 MobiDBLite consensus disorder prediction 335 359 - -
Gso4g0944 827 MobiDBLite consensus disorder prediction 387 415 - -
Gso4g0944 827 MobiDBLite consensus disorder prediction 226 280 - -
Gso4g0944 827 ProSitePatterns Serine/Threonine protein kinases active-site signature. 566 578 IPR008271 GO:0004672|GO:0006468
Gso4g0944 827 Gene3D Transferase(Phosphotransferase) domain 1 529 794 - -
Gso4g0944 827 ProSiteProfiles Protein kinase domain profile. 445 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g0944 827 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL1 ISOFORM X1 1 826 - -
Gso4g0944 827 MobiDBLite consensus disorder prediction 259 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0944 Gso-Chr4 11558028 11563031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0944 370 827 AGC Kinase Gene Family AT3G52890 65.962 0.0 641
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Gso4g0944 Pkinase 1.9e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0944 - - gmx:100789339 1509.2