Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0938 ATGGAATCCCAATTAATTGATGGTAATGATGAGATGGAAGTTTCTGGGGATGTGGGTTTGAGTACGTGTGAAGTTCAGATGCATCAAGAAACATATGAAGCTGGGTTGCAATTTCGGCGGATCACACTGGATTGCCGTGGAAGATTGAGACTCGGGTGCAGTGCAGTGCTTTTTGTGAGTCTGTTTGGATGTTTTTCTGTGGATCCAAATGAGGGGTGTAGAGTACTAGAGAGTTCTTCTTGGGGAGAGTTGGGTATCTGTGAAGATCATGCTATTCAGGAACCATATGAAGGCATGGAATTTGAATCTGAAGATGCTGCTAAGCTATTCTATGATGAATATGCCCGGCGATTAGGATTTGTCATGCGTGTGATGTCTTGTCGACGCTCAGAAAGGGATGGTAGGATTCTTGCCCGCAGACTTGGATGTAATAAAGAGGGTTATTGTGTCAGCATCCGAGGTAAATTTGCGTCAGTTCGTAAACCTAGGGCAAGCACAAGGGAAGGTTGTAAGGCAATGATTCATATCAAATATGATAAGTCTGGAAAATGGGTGATAACAAAGTTTGTGAAGGATCATAATCATCCATTAGTAGTCTCTCCACGTGAAGCACGCCAAACAATGGATGAGAAGGATAAGAAAATTCAGGAATTAACAGCAGAGCTTCGGCTTAAAAAACGGTTGTGTGCAACATATCAAGAACAGTTGACTTCTTTTATGAAAATTGTTGAAGAGCACAATGAGAAGCTATCTGCCAAAATTCATCATGTAGTTAATAATCTTAAAGAATTTGAATCCATAGAAGAGCTTTTGCACCAGACATAA 825 0.4097 MESQLIDGNDEMEVSGDVGLSTCEVQMHQETYEAGLQFRRITLDCRGRLRLGCSAVLFVSLFGCFSVDPNEGCRVLESSSWGELGICEDHAIQEPYEGMEFESEDAAKLFYDEYARRLGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFASVRKPRASTREGCKAMIHIKYDKSGKWVITKFVKDHNHPLVVSPREARQTMDEKDKKIQELTAELRLKKRLCATYQEQLTSFMKIVEEHNEKLSAKIHHVVNNLKEFESIEELLHQT* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0938 274 Pfam FAR1 DNA-binding domain 110 198 IPR004330 -
Gso4g0938 274 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 66 273 - -
Gso4g0938 274 Coils Coil 208 235 - -
Gso4g0938 274 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 66 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0938 Gso-Chr4 11410040 11416636 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gso4g0938 FAR1 1.9e-28 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0938 - - gsj:114409330 558.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0938 4 11410040 11416636 Gso6g2665 6 48413489 48417596 GST