Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0925 ATGTCGTCGTCGAATTCGCCGTGTGCGGCGTGCAAGATTCAGCGTCGGAAGTGCACGCAGGAGTGTGTTTTCGCGCCGTATTTTCCGCCGGACAATCCGCAGCGGTTCGCGTACGTGCACAAGGTGTTCGGGGCGAGCAACGTGGCCAAGCTACTCAACGAGCTTAACGCGGCGCAGCGCGAAGACGCGATTAAGTCCTTAGCATACGAGGCAGAAGCGCGTTTGCGGGACCCGGTGTATGGCTGCGTGGGTCTGATCTCCATCCTCCAGCACAGACTCAAACAGCTGCAGAGCGAACTCCACCGCGCCAAAAAGGAACTCGCTTCCTACGTCGGACCCCAGGCCATGCTTCCTCCTCCGCCTCCTCCCCCTCTGCTGCCACCACAGTCACCCCGCACTTTCTCGCTTTTCCCTTTCAAAACCGCACCCACCAATCAGCAGGATCTTTTCGGCTTCCACGACGATGGCGGTGCTTCGGCTTCCCACGGTGTATTGAACCACCACCTCGCCTTATTCTCGCCTTCCCCCGCAGTTGATCACGCGTTTTCTCACCCGCCGATGCACTCTCTTGCACTTCCGCATCACTCACACCTTACGCGTTCCCCTATGCAACCCAGGCACCAAACTGATCCGGCTTAG 639 0.59 MSSSNSPCAACKIQRRKCTQECVFAPYFPPDNPQRFAYVHKVFGASNVAKLLNELNAAQREDAIKSLAYEAEARLRDPVYGCVGLISILQHRLKQLQSELHRAKKELASYVGPQAMLPPPPPPPLLPPQSPRTFSLFPFKTAPTNQQDLFGFHDDGGASASHGVLNHHLALFSPSPAVDHAFSHPPMHSLALPHHSHLTRSPMQPRHQTDPA* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0925 212 Coils Coil 86 106 - -
Gso4g0925 212 MobiDBLite consensus disorder prediction 183 212 - -
Gso4g0925 212 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Gso4g0925 212 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 119 - -
Gso4g0925 212 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Gso4g0925 212 PANTHER LOB DOMAIN-CONTAINING PROTEIN 6-RELATED 1 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0925 Gso-Chr4 11139052 11140993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0925 1 132 AS2 family AT5G66870 78.195 1.06e-68 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gso4g0925 LOB 3e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0925 - - gmx:100812543 424.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0925 4 11139052 11140993 Gso6g0899 6 8622425 8624291 GST