Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0833 ATGGCTGGCCATATGGGTAGAGGTGTCATAGAGGAGCAGGTATGGAGGAAGGGACCTTGGACTGCTGAAGAGGACAGGTTGCTTGTTGAGTATGTCAGGTTGCATGGTGAAGGCAGATGGAACTCTGTTGCTAGGCTTGCAAAACACGAACAGTGCTACGAAATGGCCAAGATGATGCTGAAGGTCACTTTTGTATCAGAGACTATTTTAAACACCGTTAACCCCAAGGACCAGATTTACAGTGAAGTTAGTAGGTCATTTGCTGTGAGGTGGAAAGATGTACTTGATCGTTTACGAAATTTGTTTGACAAGGATGGAAATTTGCATATCGCTCTCTACAACTAA 345 0.4435 MAGHMGRGVIEEQVWRKGPWTAEEDRLLVEYVRLHGEGRWNSVARLAKHEQCYEMAKMMLKVTFVSETILNTVNPKDQIYSEVSRSFAVRWKDVLDRLRNLFDKDGNLHIALYN* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0833 114 CDD SANT 19 60 IPR001005 -
Gso4g0833 114 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 49 IPR017930 -
Gso4g0833 114 ProSiteProfiles Myb-like domain profile. 16 60 IPR001005 -
Gso4g0833 114 PANTHER MYB TRANSCRIPTION FACTOR 1 48 - -
Gso4g0833 114 SUPERFAMILY Homeodomain-like 15 52 IPR009057 -
Gso4g0833 114 Gene3D - 16 107 - -
Gso4g0833 114 Pfam Myb-like DNA-binding domain 17 46 IPR001005 -
Gso4g0833 114 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 1 48 IPR044676 GO:0003700|GO:0006355|GO:0043565
Gso4g0833 114 SMART sant 16 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0833 Gso-Chr4 8826468 8831334 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0833 12 105 MYB Transcription Factor Family AT4G13480 40.000 1.25e-17 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gso4g0833 Myb_DNA-binding 1.5e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0833 K09422 - gsj:114410507 238.039