Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0803 ATGGTCTGTCCGGGTTCAACGAAATTGTCTCATGACGTTAGGTTCTACAGTAATACTGGATTCTGTAGTTTCCATCATAACCGGATGGGGGTCGGTCGATTACATTTGGTCACCTTAAATCTTTCACCATGTAGTTTGAAGCAAGACTCTTCAGCACTCCATCTTTTAAGTAGACCACATGCCCCGATAAGGCATGTGCCTTCCAGATGTAATGTTTTCATTTGTCAGTCTGTCCTAATACCAGGTGGAGGAAGTGGAACTCCACTGATGAAATCTGCTAGTGTTATTTTAACAAGGTCATATGATGCTCTACAAGGAAACCCTACTTTTCTTCAATTGATCCCAGCTATTGGTATCATTGCCTTTGCTGTTTGCGGTCTTGAGCCACTCCTTCGTCTCAGCAGGGTTTTGTTCCTTCAGAGTACTGACAGTAGTTGGAAGAAAAGTAGTTCGCGATATATCATGACATCTTATTTTCAGCCATTGCTGTTGTGGACTGGGGCAATGCTGGTATGCAGGGCATTAGATCCACTAGTCCTACCATCTGAGTCCAGCCAGGTTGTGAAGCAGCGGCTGCTGAATTTTGTGAGATCTTTGTCAACAGTGATTTCATTTGCCTACTGTTTATCAAGCTTAATTCAACAAGCACAAAAATTCTTTCTGGAGGGAAATGATTCCAGTGGTGCAAGAAATATGGGCCTTGATTTTGCTGGGAAGGCTGTATATACTGCTGTATGGGTTGCTGCTGTGTCATTGTTCATGGAGTTGCTAGGTTTCTCCACACAGAAGTGGGTAACTGCTGGTGGTTTGGGCACAGTATTGCTCACTCTAGCAGGTCGTGAGATATTTACAAACTTTCTTTCGAGCATAATGATCCATGCAACTCGGCCATTTATTGTGAACGAGTGGATTCAAACGAAGATTGAAGGATATGAGGTTTCTGGCACAGTTGAGCATGTAGGCTGGTGGTCACCAACCATCATCAGAGGTGATGATCGCGAGGCAGTTCATATTCCTAACCACAAGTTTACTGTAAATGTTGTGAGAAATCTGAGCCAGAAATCTCATTGGCGTATCAAGAGTTACATTGCTATCAGTCACTTGGATGTTAACAAAATTAATAATATTGTAGCTGATATGCGCAAGGTTTTGTCTAAAAATCCTCAAGTAGAGCAGCAAAAATTACACCGAAGGGTTTTTTTGGAGAATGTCAATCCTGAAAATCAGGCTCTTATGATATTAATATCTTGCTTTGTGAAAACTTCTCATTTTGAGGAGTATCTCTGTGTTAAGGAGGCAATCCTTTTGGATCTTCTCAGAGTCGTCAGTCATCATCGAGCCAGGCTAGCCACTCCCATCCGCACTGTTCAGAAAATATACAGTGAGGCTGACTCAGAAAATATACCCTTTGGGGACACCATTTTCACTCGATCTAGTGCGGGAAATCGCCCATTCCTACTGATAGAACCACTATATAAAGTTAATGGTGAAGATAAAACTAAGCCTTCAACACGTTCAACTCGTGCAAGTGAGGAAAAAGATTTCAAGATTGATGAAACCATGGCATCTGACACCAAAGAAGATGAGAACTTTGCAGCAACATTAACCTCCTCACCTGATGTAAATTCCAAGGATAAATCCAAGTCACTGTCTGAAGCCCTGCCAAAAAAGGAAAATGCAGTAGATGCAGGAAAGGGACCTACAGTTCCTGTATCCAAAAACCTTGTTCAAAGTGCTGCGCCTGAAACCTCTCCTGTTACTTCCCACGAGATCAATTCTGCAACTTCTTCGCAATCAAAACAAGATGAAGAGAAATCTTCTGTCCCTCTGTCATCAGTTAGGCCATCCTTGGAAGAGAACATTCTACTCGGGGTTGCCATAGAAGGCTCAAAACGTACTCTTCCAATTGAGGAAGAAATGACTCCATCTCCTATGCCTGCAGAGTCACAAGAATTTGCTGTTCAACGGAATGGGGGTGGACCTCCTGCTAGTAAGGATAAGAAGGATGGCCAGTCTTCATTTCCAACTAGTAAACAGAATGACTAA 2046 0.4257 MVCPGSTKLSHDVRFYSNTGFCSFHHNRMGVGRLHLVTLNLSPCSLKQDSSALHLLSRPHAPIRHVPSRCNVFICQSVLIPGGGSGTPLMKSASVILTRSYDALQGNPTFLQLIPAIGIIAFAVCGLEPLLRLSRVLFLQSTDSSWKKSSSRYIMTSYFQPLLLWTGAMLVCRALDPLVLPSESSQVVKQRLLNFVRSLSTVISFAYCLSSLIQQAQKFFLEGNDSSGARNMGLDFAGKAVYTAVWVAAVSLFMELLGFSTQKWVTAGGLGTVLLTLAGREIFTNFLSSIMIHATRPFIVNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVNVVRNLSQKSHWRIKSYIAISHLDVNKINNIVADMRKVLSKNPQVEQQKLHRRVFLENVNPENQALMILISCFVKTSHFEEYLCVKEAILLDLLRVVSHHRARLATPIRTVQKIYSEADSENIPFGDTIFTRSSAGNRPFLLIEPLYKVNGEDKTKPSTRSTRASEEKDFKIDETMASDTKEDENFAATLTSSPDVNSKDKSKSLSEALPKKENAVDAGKGPTVPVSKNLVQSAAPETSPVTSHEINSATSSQSKQDEEKSSVPLSSVRPSLEENILLGVAIEGSKRTLPIEEEMTPSPMPAESQEFAVQRNGGGPPASKDKKDGQSSFPTSKQND* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0803 681 SUPERFAMILY Sm-like ribonucleoproteins 282 352 IPR010920 -
Gso4g0803 681 MobiDBLite consensus disorder prediction 545 559 - -
Gso4g0803 681 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 2, CHLOROPLASTIC 1 674 - -
Gso4g0803 681 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 674 IPR045042 -
Gso4g0803 681 MobiDBLite consensus disorder prediction 571 614 - -
Gso4g0803 681 Gene3D - 195 296 - -
Gso4g0803 681 MobiDBLite consensus disorder prediction 497 681 - -
Gso4g0803 681 MobiDBLite consensus disorder prediction 497 526 - -
Gso4g0803 681 MobiDBLite consensus disorder prediction 527 544 - -
Gso4g0803 681 Pfam Mechanosensitive ion channel 239 446 IPR006685 GO:0016020|GO:0055085
Gso4g0803 681 Gene3D - 298 353 IPR023408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0803 Gso-Chr4 8323043 8329380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0803 9 654 Mechanosensitive Ion Channel Family AT1G58200 56.315 0.0 744
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0803 K22047 - gmx:100796022 1324.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0803 4 8323043 8329380 Gso6g0807 6 7636128 7645736 GST