Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0801 ATGAAAACAAGCAGAGCCGAAGCGGAACGCTTGCTAGCGATCGGCGAGAAGCTGCTTCAGAGCCGCGATCTGAGCAGCTCGCGCGACTTCGCCATCCTCGCCCAGGAAGCCGAGCCGCTCCTCGAAGGCTCCGACCAGATCCTGGCCATCGTCGAAGTCCTCCTCGCCGCCGAGAAGCCAATCACCAACGACCACCTCGATTGGTACGCTATTCTCCAGGTCGATCGCACGTGCCAGGACCTCGATCTCATCAAAAAACAGTACCGTAGACTCGGTCTTCTTCTTCACCCCGACAAGAACCCTTTCTCCCTCGCCGACCACGCCTTCAAGCTCGTCTCCGATGCCTGGGCCGTGCTTTCCGACCCGGTCCAGAAAGCGATTTATGACAGGGACGTGGCCGGTTCGGTCGAACCGGAGAGCTTCTGGACCGCGTGTCCGTACTGTTATTTTCTCTACGAGTACCCTGCGGTTTGCGAGGGGTGCTGCCTGAGGTGCCAGAATTGCGAGAGGTCCTTCCATGGGCTTTCGATTCCCTCGCTGCCGCCGCTCGTGCCGGGCCAGGAGGCCTATTATTGTAACTGGGGCTGCTTGCCCATGGGCTTTGTGTTTGGGAATTTGGGCTCCGACGGGCCTGGGCCTGGGCCTATGGTCGAGAATGGACCTACTGCGGTGGCGGTTTCGAATGGGGTTAACGTTGCTTCGCGGAAGCGTGGAAGGCCGCGAAAGGGGGTTTGA 735 0.5986 MKTSRAEAERLLAIGEKLLQSRDLSSSRDFAILAQEAEPLLEGSDQILAIVEVLLAAEKPITNDHLDWYAILQVDRTCQDLDLIKKQYRRLGLLLHPDKNPFSLADHAFKLVSDAWAVLSDPVQKAIYDRDVAGSVEPESFWTACPYCYFLYEYPAVCEGCCLRCQNCERSFHGLSIPSLPPLVPGQEAYYCNWGCLPMGFVFGNLGSDGPGPGPMVENGPTAVAVSNGVNVASRKRGRPRKGV* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0801 244 ProSiteProfiles dnaJ domain profile. 67 132 IPR001623 -
Gso4g0801 244 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 1 239 - -
Gso4g0801 244 SMART dnaj_3 66 124 IPR001623 -
Gso4g0801 244 ProSitePatterns Nt-dnaJ domain signature. 109 128 IPR018253 -
Gso4g0801 244 CDD DnaJ 67 121 IPR001623 -
Gso4g0801 244 Pfam DnaJ domain 67 129 IPR001623 -
Gso4g0801 244 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 239 - -
Gso4g0801 244 SUPERFAMILY Chaperone J-domain 61 131 IPR036869 -
Gso4g0801 244 Gene3D DnaJ domain 56 142 IPR036869 -
Gso4g0801 244 PRINTS DnaJ domain signature 69 87 IPR001623 -
Gso4g0801 244 PRINTS DnaJ domain signature 88 103 IPR001623 -
Gso4g0801 244 PRINTS DnaJ domain signature 104 124 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0801 Gso-Chr4 8283813 8285016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0801 4 233 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 52.174 2.39e-83 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0801 - - gmx:100802055 493.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1535 14 46854069 46856743 Gso4g0801 4 8283813 8285016 PCT
Gso2g1822 2 42134494 42136173 Gso4g0801 4 8283813 8285016 PCT