Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0787 ATGGCAGCAGCAGAGGGGCTAAACAGAGAGCAGTACGTGTACTTGGCGAAGCTGTCGGAGCAGGCGGAGCGGTACGAGGAGATGGTGGAGTTCATGCAGAAGGTGGTGGTGGGGTCGACGCCGGCGTCGGAGCTCACGGTGGAGGAGCGCAACCTCCTCTCGGTGGCCTACAAGAACGTCATCGGCTCGCTGCGTGCCGCGTGGCGCATCGTCTCCTCCATCGAGCAGAAGGAGGAGGGCCGCAAGAACGACGACCACGTCTCCCTCGTCAAGCACTACAGATCCAAGGTCGAGAACGAGCTCACTCAGGTCTGCGCCAGCATCCTCAGCCTCCTCGACTCCAACCTCGTACCCTCCGCCTCCGCCAGCGAGTCCAAGGTCTTCTACTTGAAGATGAAGGGCGATTACCACCGCTATCTCGCCGAGTTTAAGGTTGGGGACGAAAGAAAAACCGCTACTGAGGATACCATGTTGTCTTACAAGGCTGCCCAGGATATTGCTTCTGCGGATCTTCCCCCTACTCACCCCATCAGATTGGGTCTTGCTCTCAACTTCTCCGTCTTCTACTATGAAATCCTCAACCAGTCTGATAAAGCGTGTGCCATGGCTAAACAGGCTTTTGAGGAAGCAATTGCTGAGCTGGACACCTTGGGAGAAGAATCTTACAAAGACAGCACGCTCATAATGCAGCTTTTAAGAGACAACCTCACCCTTTGGACTTCTGATGTTCAGGACCAGCTAGATGAGCCCTGA 753 0.5551 MAAAEGLNREQYVYLAKLSEQAERYEEMVEFMQKVVVGSTPASELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNDDHVSLVKHYRSKVENELTQVCASILSLLDSNLVPSASASESKVFYLKMKGDYHRYLAEFKVGDERKTATEDTMLSYKAAQDIASADLPPTHPIRLGLALNFSVFYYEILNQSDKACAMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDVQDQLDEP* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0787 250 Gene3D - 1 249 IPR036815 -
Gso4g0787 250 Coils Coil 15 35 - -
Gso4g0787 250 Pfam 14-3-3 protein 15 240 IPR023410 -
Gso4g0787 250 PANTHER BNAC02G00320D PROTEIN 6 246 - -
Gso4g0787 250 PANTHER 14-3-3 PROTEIN 6 246 IPR000308 -
Gso4g0787 250 PIRSF 14-3-3 4 249 IPR000308 -
Gso4g0787 250 ProSitePatterns 14-3-3 proteins signature 1. 50 60 IPR023409 -
Gso4g0787 250 SUPERFAMILY 14-3-3 protein 7 242 IPR036815 -
Gso4g0787 250 SMART 1433_4 9 249 IPR023410 -
Gso4g0787 250 ProSitePatterns 14-3-3 proteins signature 2. 222 241 IPR023409 -
Gso4g0787 250 PRINTS 14-3-3 protein zeta signature 44 73 IPR000308 -
Gso4g0787 250 PRINTS 14-3-3 protein zeta signature 93 117 IPR000308 -
Gso4g0787 250 PRINTS 14-3-3 protein zeta signature 124 146 IPR000308 -
Gso4g0787 250 PRINTS 14-3-3 protein zeta signature 159 185 IPR000308 -
Gso4g0787 250 PRINTS 14-3-3 protein zeta signature 186 212 IPR000308 -
Gso4g0787 250 PRINTS 14-3-3 protein zeta signature 213 242 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0787 Gso-Chr4 8076843 8079362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0787 4 244 14-3-3 family AT5G10450 85.477 2.95e-156 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0787 K06630 - gmx:547890 486.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0787 4 8076843 8079362 Gso4g0787 4 8076843 8079362 ECH
Gso4g0787 4 8076843 8079362 Gso6g0793 6 7480349 7482654 GST