Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0758 ATGTTCGCCGCCTTACAACTCCTCCTCCTTCTTCTTTCACTCTTCTCACTACTCACCAGCGCCCAATCCGAGGACCAGCGTCAAATCCTTCTGAACCTAAAATCCTCCCTCCAGAATTCAAATTCCAAACTCCTTCACTCATGGAACGCCACGAATTCCGTTTGCACCTTCCACGGAGTCACTTGCAACTCCCTCAATTCCGTCACCGAAATCAACCTCTCGAACCAAACTCTCTCCGGTGTTCTCCCCTTCGACTCACTCTGCAAACTTCCGTCCCTCCAAAAACTCGTGTTCGGTTTCAACAACTTAAACGGCAACGTTTCAGAGGACATTAGAAACTGCGTCAACTTGCGCTACTTGGACTTGGGAAACAATCTTTTCTCCGGTCCCTTCCCCGATATATCTCCTCTCAAACAATTGCAGTACCTGTTTTTAAACAGAAGTGGATTTTCGGGAACTTTTCCGTGGCAGTCGCTGTTGAACATGACGGGTCTGTTACAGTTAAGTGTCGGAGATAACCCTTTCGACTTAACGCCGTTTCCCAAAGAGGTTGTTAGCCTCAAGAATCTCAATTGGCTCTATCTATCGAACTGCACCCTCAGAGGGAAGCTTCCGGTAGGACTGGGCAACCTCACGGAGCTCACCGAATTGGAATTCTCTGACAATTTCCTCACCGGCGATTTTCCCGCGGAGATTGTGAACCTTCGGAAGCTATGGCAGCTGGTGTTCTTCAACAACTCCTTCACAGGAAAGATTCCAATTGGGTTGAGAAACCTCACGAGACTTGAGTTTTTGGATGGGTCAATGAATAAGCTGGAAGGTGATTTGTCTGAATTGAAGTACTTGACCAATCTTGTTTCTCTGCAATTCTTTGAGAACAATTTGTCGGGGGAGATTCCGGTTGAGATAGGCGAGTTCAAACGCCTCGAGGCTCTGTCTTTGTACAGGAACAGATTGATAGGTCCTATTCCTCAGAAGGTTGGTTCCTGGGCAGAGTTTGCTTACATCGACGTGTCGGAGAATTTCTTGACGGGGACGATTCCGCCGGATATGTGTAAAAAGGGAGCCATGTGGGCGCTTCTCGTGCTTCAAAACAAGCTCTCCGGCGAGATTCCAGCCACCTACGGCGACTGTTTGAGTTTGAAACGGTTCAGAGTCAGCAACAACTCGCTCTCCGGCGCCGTCCCTGCCTCAGTATGGGGACTTCCAAACGTGGAAATAATAGATATTGAGCTGAATCAGTTATCAGGTTCGGTTAGTTGGAATATAAAAAACGCGAAAACACTGGCTTCAATATTCGCCAGGCAGAATCGGTTGTCCGGTGAAATACCAGAAGAAATCTCAAAAGCGACGTCGTTGGTGAATGTGGACCTGAGCGAGAATCAAATCTCGGGGAACATTCCAGAAGGAATCGGCGAGCTAAAACAACTAGGTAGCCTTCATTTACAGAGCAACAAGTTATCAGGTTCGATACCGGAATCTCTGGGTTCCTGTAATTCCCTCAACGACGTTGACCTATCGCGAAATTCACTCTCCGGAGAAATCCCTTCCTCCCTGGGTTCTTTCCCCGCTTTAAATTCACTGAATCTTTCAGCAAACAAACTCTCCGGTGAAATCCCCAAGAGTTTAGCTTTCCTCAGATTGAGCCTATTTGATTTATCATATAACCGGTTAACCGGTCCAATTCCACAAGCTCTAACCCTCGAAGCTTACAACGGAAGCCTCTCGGGAAACCCTGGTTTATGCAGCGTCGACGCGAATAACTCCTTCCCGCGTTGCCCTGCTTCCTCTGGCATGTCGAAGGACATGCGCGCGCTCATAATATGCTTCGTGGTGGCGTCGATTTTGCTGCTCTCGTGTTTGGGCGTTTACCTGCAACTCAAGAGGAGGAAGGAGGAGGGAGAGAAATACGGGGAGCGTTCACTGAAGAAAGAAACGTGGGACGTGAAATCGTTCCACGTGTTGAGTTTCTCGGAGGGGGAGATTCTAGATTCCATCAAGCAGGAGAATCTCATAGGAAAAGGAGGTTCCGGGAACGTGTACAGGGTCACGCTTTCCAACGGGAAAGAACTCGCGGTGAAGCATATTTGGAACACCAATGTCCCCGCCAGGAGAAAGTCGTCGTGGAGCAGCACTCCCATGCTTGGGAATAAGTTCGCTGCTGGGAAGTCAAAGGAGTTTGACGCGGAGGTTCAGGCCTTGAGCTCCATAAGGCACGTAAATGTCGTGAAGCTTTATTGCAGCATAACCAGCGAGGATTCAAGCTTGTTGGTGTACGAGTATTTGCCCAATGGGAGCTTGTGGGACCGGCTTCACACGAGTAGGAAGATGGAGCTTGATTGGGAAACCAGGTATGAAATTGCTGTTGGGGCAGCGAAAGGGTTGGAGTATTTGCATCATGGGTGTGAGAGGCCCGTCATTCATAGAGATGTTAAGTCTAGTAACATATTGTTGGATGAGTTTTTGAAACCTAGGATTGCCGATTTCGGGCTTGCTAAGCTTGTCCAAGCCAACGTTGGCAAGGATTCCTCCACTCGTGTCATTGCCGGAACCCACGGCTACATTGCTCCTGAATATGGCTACACATACAAGGTGAACGAGAAGAGTGATGTGTACAGCTTTGGGGTGGTGTTGATGGAGTTAGTAACTGGGAAAAGGCCAATTGAACCGGAGTTTGGGGAAAATAAGGACATAGTGAGCTGGGTTCATAACAAGGCACGAAGCAAAGAGGGGCTTAGGAGTGCGGTGGATTCGAGAATTCCGGAGATGTATACAGAGGAAACTTGTAAGGTGTTGAGAACTGCAGTTTTGTGCACGGGGACTCTTCCAGCTTTGAGACCAACCATGAGAGCTGTGGTTCAAAAACTTGAGGATGCTGAGCCTTGTAAATTGGTTGGGATTGTTATTAGCAAAGACGGCAGTGAAAAGAAAATAGGAGTCAATGACAAGTAA 2952 0.482 MFAALQLLLLLLSLFSLLTSAQSEDQRQILLNLKSSLQNSNSKLLHSWNATNSVCTFHGVTCNSLNSVTEINLSNQTLSGVLPFDSLCKLPSLQKLVFGFNNLNGNVSEDIRNCVNLRYLDLGNNLFSGPFPDISPLKQLQYLFLNRSGFSGTFPWQSLLNMTGLLQLSVGDNPFDLTPFPKEVVSLKNLNWLYLSNCTLRGKLPVGLGNLTELTELEFSDNFLTGDFPAEIVNLRKLWQLVFFNNSFTGKIPIGLRNLTRLEFLDGSMNKLEGDLSELKYLTNLVSLQFFENNLSGEIPVEIGEFKRLEALSLYRNRLIGPIPQKVGSWAEFAYIDVSENFLTGTIPPDMCKKGAMWALLVLQNKLSGEIPATYGDCLSLKRFRVSNNSLSGAVPASVWGLPNVEIIDIELNQLSGSVSWNIKNAKTLASIFARQNRLSGEIPEEISKATSLVNVDLSENQISGNIPEGIGELKQLGSLHLQSNKLSGSIPESLGSCNSLNDVDLSRNSLSGEIPSSLGSFPALNSLNLSANKLSGEIPKSLAFLRLSLFDLSYNRLTGPIPQALTLEAYNGSLSGNPGLCSVDANNSFPRCPASSGMSKDMRALIICFVVASILLLSCLGVYLQLKRRKEEGEKYGERSLKKETWDVKSFHVLSFSEGEILDSIKQENLIGKGGSGNVYRVTLSNGKELAVKHIWNTNVPARRKSSWSSTPMLGNKFAAGKSKEFDAEVQALSSIRHVNVVKLYCSITSEDSSLLVYEYLPNGSLWDRLHTSRKMELDWETRYEIAVGAAKGLEYLHHGCERPVIHRDVKSSNILLDEFLKPRIADFGLAKLVQANVGKDSSTRVIAGTHGYIAPEYGYTYKVNEKSDVYSFGVVLMELVTGKRPIEPEFGENKDIVSWVHNKARSKEGLRSAVDSRIPEMYTEETCKVLRTAVLCTGTLPALRPTMRAVVQKLEDAEPCKLVGIVISKDGSEKKIGVNDK* 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0758 983 ProSitePatterns Protein kinases ATP-binding region signature. 672 694 IPR017441 GO:0005524
Gso4g0758 983 PANTHER RECEPTOR-LIKE PROTEIN KINASE 7 6 968 - -
Gso4g0758 983 SUPERFAMILY L domain-like 278 589 - -
Gso4g0758 983 Gene3D Phosphorylase Kinase; domain 1 649 761 - -
Gso4g0758 983 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 6 968 - -
Gso4g0758 983 SUPERFAMILY L domain-like 37 350 - -
Gso4g0758 983 ProSiteProfiles Protein kinase domain profile. 666 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g0758 983 ProSitePatterns Serine/Threonine protein kinases active-site signature. 806 818 IPR008271 GO:0004672|GO:0006468
Gso4g0758 983 SUPERFAMILY Protein kinase-like (PK-like) 657 956 IPR011009 -
Gso4g0758 983 SMART serkin_6 666 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g0758 983 Gene3D Ribonuclease Inhibitor 24 134 IPR032675 -
Gso4g0758 983 Pfam Protein kinase domain 668 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g0758 983 Pfam Leucine rich repeat N-terminal domain 24 63 IPR013210 -
Gso4g0758 983 Gene3D Ribonuclease Inhibitor 361 593 IPR032675 -
Gso4g0758 983 Gene3D Ribonuclease Inhibitor 135 360 IPR032675 -
Gso4g0758 983 Gene3D Transferase(Phosphotransferase) domain 1 762 965 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0758 Gso-Chr4 7593618 7597115 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0758 9 976 Receptor kinase-like Gene Family AT1G09970 60.534 0.0 1141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gso4g0758 Pkinase 1.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0758 - - gmx:100779554 1893.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0758 4 7593618 7597115 Gso4g0758 4 7593618 7597115 ECH
Gso4g0758 4 7593618 7597115 Gso6g0764 6 7124420 7127959 GST