Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0757 ATGAGCCACCCCTTCATCACCCTCTTCGCCACCATCATACTCATCATAGTTTCCCTCTCACAGGCCATCACCACCAAGAATAATAATCAGTCACAGTTTTTCTCTCTGATGAAGGACTTGTCTCTCTCGGGGAAATACCCCACGAATTGGGACGCTGCAGGGAAATTAGTACCCGTGTGCGGCTTCACCGGAGTCACCTGCAACACCAAAGGTGACGTTATCAGCCTCGACCTCTCAGATCGGTCATCACTTTCTGGAAATTTCCCACCAGATATATGCTCTTACCTTCCACAATTACGTGTTCTCCGCCTCGGCCACACTAGGTTCAAGTTCCCCATAGACACCATCCTCAACTGTTCCCACCTGGAAGAGCTTAACATGAACCACATGTCCCTCACCGGCACGCTCCCTGATTTCTCTTCCTTGAAAAAATCCCTCAGGGTTCTCGACTTGTCCTACAACAGCTTCACTGGCCAGTTCCCCATGTCGGTCTTCAACCTCACCAACCTCGAGGAGCTCAACTTCAACGAAAACGGAGGCTTCAATCTGTGGCAGTTACCTGCGGATATCGACAGGTTGAAAAAACTCAAGGTCATGGTGCTCACAACGTGCATGGTGCATGGCCAAATCCCTGCGTCCATAGGGAACATAACTTCCCTCACCGATCTTGAGCTGAGTGGGAATTTCCTCACGGGACAAATTCCCAAAGAGCTTGGCCAGCTGAAGAATTTGCAACAGCTTGAGCTTTACTATAACTACCACCTCGTTGGGAACATACCTGAGGAGTTGGGGAACCTGACGGAGCTCGTGGATTTGGATATGTCGGTGAACAAGTTCACCGGGAGCATCCCCGCGTCGGTGTGTAGGCTTCCGAAGCTTCAAGTGTTGCAGCTCTACAACAACAGCCTCACCGGAGAAATCCCAGGTGCGATTGAAAACTCAACAGCTTTGAGAATGTTGTCTCTCTACGACAACTTCCTCGTAGGGCATGTTCCCAGGAAACTGGGACAGTTCTCCGGGATGGTGGTTCTTGATTTGTCGGAGAACAAGTTTTCTGGACCGTTGCCAACCGAGGTTTGCAAGGGAGGTACGCTTGGGTACTTTCTCGTTCTGGATAACATGTTTTCTGGTGAGATACCACAGAGTTATGCCAACTGCATGATGCTGTTGAGGTTTAGAGTGAGCAACAACCGTTTGGAGGGGTCTATTCCCGCGGGACTCCTTGCTTTGCCACACGTTTCAATCATTGATTTGAGTAACAACAACCTGACCGGTCCGATTCCTGAGATTAACGGAAATTCTAGAAACTTGTCTGAACTGTTCCTTCAGAGGAACAAGATTTCAGGTGTCATAAACCCCACCATATCTAGAGCCATTAATTTGGTCAAGATTGATTTCAGCTATAACCTTCTGTCTGGTCCAATCCCTTCCGAAATTGGCAACCTGAGAAAGCTTAATTTGCTTATGCTGCAAGGAAACAAGCTGAATTCCTCCATCCCCGGTTCACTTTCTTCATTGGAGTCTCTCAACCTTCTTGATCTCTCCAACAATCTTTTAACCGGGAGCATCCCTGAAAGCCTCTCTGTGCTGCTACCAAACTCTATTAACTTCTCACACAACCTTCTTTCGGGTCCAATTCCTCCCAAACTTATAAAAGGGGGTTTGGTGGAAAGCTTTGCTGGGAATCCTGGGTTGTGTGTGTTACCGGTGTATGCTAATTCATCGGATCATAAGTTCCCTATGTGTGCAAGTGCCTACTACAAGAGTAAGAGGATAAACACCATCTGGATAGCTGGGGTGTCTGTGGTTTTGATCTTCATTGGCTCTGCCTTGTTTCTCAAACGTAGGTGCAGCAAAGACACTGCTGCAGTAGAACATGAGGACACACTGTCTTCTTCGTTCTTCTCTTATGATGTCAAGAGCTTCCACAAGATATCTTTCGACCAAAGGGAGATAGTTGAGTCCTTGGTGGACAAGAACATAATGGGGCATGGAGGGTCTGGGACTGTGTACAAGATTGAGTTGAAAAGTGGTGATATTGTTGCGGTGAAGAGGCTGTGGAGTCACGCGTCCAAGGATTCGGCTCCGGAGGATCGGTTATTTGTAGACAAGGCATTGAAAGCAGAGGTGGAGACCCTGGGAAGCATAAGACACAAGAACATTGTGAAACTGTACTGCTGCTTCTCCAGTTATGACTGCAGCCTTTTGGTTTATGAGTACATGCCAAATGGTAATCTTTGGGATTCACTGCACAAAGGTTGGATCCTCTTGGATTGGCCTACTCGTTATAGAATAGCACTGGGGATTGCGCAGGGTTTGGCATACCTCCACCATGATTTGCTTCTTCCTATTATCCACCGAGATATCAAGTCAACTAATATCCTGTTGGATGTGGATAACCAGCCCAAGGTTGCAGACTTTGGGATTGCCAAGGTTTTGCAAGCAAGAGGAGGAAAGGATTCCACTACAACTGTTATTGCAGGAACATATGGTTACTTAGCCCCAGAATTTGCATATTCATCAAGGGCCACCACCAAGTGCGATGTCTACAGTTATGGGGTGATTTTGATGGAACTGTTAACTGGGAAGAAGCCCGTTGAGGCAGAATTTGGAGAGAACAGAAACATTGTTTTCTGGGTTTCCAACAAAGTCGAAGGCAAGGAAGGGGCTAGACCAAGTGAGGTATTAGATCCAAAGTTGTCATGTTCATTTAAGGAAGACATGATCAAAGTGTTGCGGATTGCTATTCGCTGCACCTACAAAGCCCCAACAAGTAGACCAACCATGAAGGAGGTTGTTCAGCTTCTGATTGAGGCAGAGCCACGCGGTTCCGATTCTTGCAAGTTGTCAACCAATGATGTATCAAATGTCACCGTAATAAAGAAACCATATGAATTATAA 2901 0.4691 MSHPFITLFATIILIIVSLSQAITTKNNNQSQFFSLMKDLSLSGKYPTNWDAAGKLVPVCGFTGVTCNTKGDVISLDLSDRSSLSGNFPPDICSYLPQLRVLRLGHTRFKFPIDTILNCSHLEELNMNHMSLTGTLPDFSSLKKSLRVLDLSYNSFTGQFPMSVFNLTNLEELNFNENGGFNLWQLPADIDRLKKLKVMVLTTCMVHGQIPASIGNITSLTDLELSGNFLTGQIPKELGQLKNLQQLELYYNYHLVGNIPEELGNLTELVDLDMSVNKFTGSIPASVCRLPKLQVLQLYNNSLTGEIPGAIENSTALRMLSLYDNFLVGHVPRKLGQFSGMVVLDLSENKFSGPLPTEVCKGGTLGYFLVLDNMFSGEIPQSYANCMMLLRFRVSNNRLEGSIPAGLLALPHVSIIDLSNNNLTGPIPEINGNSRNLSELFLQRNKISGVINPTISRAINLVKIDFSYNLLSGPIPSEIGNLRKLNLLMLQGNKLNSSIPGSLSSLESLNLLDLSNNLLTGSIPESLSVLLPNSINFSHNLLSGPIPPKLIKGGLVESFAGNPGLCVLPVYANSSDHKFPMCASAYYKSKRINTIWIAGVSVVLIFIGSALFLKRRCSKDTAAVEHEDTLSSSFFSYDVKSFHKISFDQREIVESLVDKNIMGHGGSGTVYKIELKSGDIVAVKRLWSHASKDSAPEDRLFVDKALKAEVETLGSIRHKNIVKLYCCFSSYDCSLLVYEYMPNGNLWDSLHKGWILLDWPTRYRIALGIAQGLAYLHHDLLLPIIHRDIKSTNILLDVDNQPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEFAYSSRATTKCDVYSYGVILMELLTGKKPVEAEFGENRNIVFWVSNKVEGKEGARPSEVLDPKLSCSFKEDMIKVLRIAIRCTYKAPTSRPTMKEVVQLLIEAEPRGSDSCKLSTNDVSNVTVIKKPYEL* 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0757 966 Gene3D Ribonuclease Inhibitor 26 181 IPR032675 -
Gso4g0757 966 ProSiteProfiles Protein kinase domain profile. 656 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g0757 966 PANTHER RECEPTOR PROTEIN-TYROSINE KINASE CEPR1 7 947 - -
Gso4g0757 966 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 7 947 - -
Gso4g0757 966 SMART LRR_typ_2 506 530 IPR003591 -
Gso4g0757 966 SMART LRR_typ_2 167 193 IPR003591 -
Gso4g0757 966 SMART LRR_typ_2 217 241 IPR003591 -
Gso4g0757 966 SMART LRR_typ_2 410 433 IPR003591 -
Gso4g0757 966 SMART LRR_typ_2 290 314 IPR003591 -
Gso4g0757 966 SMART LRR_typ_2 482 505 IPR003591 -
Gso4g0757 966 ProSitePatterns Serine/Threonine protein kinases active-site signature. 784 796 IPR008271 GO:0004672|GO:0006468
Gso4g0757 966 SMART serkin_6 656 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g0757 966 Gene3D Transferase(Phosphotransferase) domain 1 741 959 - -
Gso4g0757 966 Pfam Protein kinase domain 658 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g0757 966 Gene3D Phosphorylase Kinase; domain 1 639 740 - -
Gso4g0757 966 SUPERFAMILY RNI-like 73 353 - -
Gso4g0757 966 Gene3D Ribonuclease Inhibitor 182 285 IPR032675 -
Gso4g0757 966 SUPERFAMILY Protein kinase-like (PK-like) 643 936 IPR011009 -
Gso4g0757 966 Gene3D Ribonuclease Inhibitor 290 576 IPR032675 -
Gso4g0757 966 SUPERFAMILY RNI-like 258 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0757 Gso-Chr4 7561566 7565579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0757 27 943 Receptor kinase-like Gene Family AT5G49660 65.472 0.0 1202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gso4g0757 Pkinase 2.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0757 - - gmx:100785822 1865.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0757 4 7561566 7565579 Gso4g0757 4 7561566 7565579 ECH
Gso4g0757 4 7561566 7565579 Gso6g0763 6 7094485 7098463 GST