Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0743 ATGGCCATCGCAACAGAGACTCAGCCTCAACAACACAAGGATTCTTCGGAGGTTTCGGGTTCAGCTGCGGAGCAAAGAAGGTGGACGCTTAACGATTTCGATATCGGAAAGCCTCTTGGAAGGGGAAAATTCGGTCACGTCTATTTGGCCAGAGAGAAGACTAGTAATCATATTGTTGCTTTGAAAGTACTCTTCAAGAGTCAATTGCAACAATCCCAAGTTGTGCATCAACTTCGACGTGAAGTTGAAATACAGAGTCATCTCCGACATCCCCACATTTTGCGCCTCTATGGATACTTTTATGATCAGAAACGAGTTTATTTGATTTTAGAGTATGCACCCAAAGGTGAACTTTACAAGGAATTGCAAAAATGCAAATATTTCAGTGAAAGGCGTGCAGCTACTTATGTTGCATCATTGGCCCGAGCCCTTATATATTGCCATGGAAAGCATGTAATACATAGGGATATTAAACCAGAGAACCTTCTTATTGGTTCACAGGGTGAGTTGAAAATAGCAGACTTTGGGTGGTCAGTGCACACATTCAATCGCAGGCGGACCATGTGTGGCACACTGGATTACCTGCCTCCTGAGATGGTGGAGAGTGTAGAACATGATGCGAGTGTGGATATATGGAGCCTTGGTGTCTTGTGCTATGAGTTTCTTTATGGAGTCCCTCCTTTTGAGGCTAAAGAACATTCTGATACTTACAGGAGGATAATACAAGTGGATCTGAAGTTCCCTCCTAAACCAATTGTGTCTTCAGCTGCAAAGGATCTCATTAGTCAGATGCTGGTCAAGGATTCCTCTCAACGTCTACCATTGCACAAACTCCTCGAACACCCTTGGATTGTTCAGAATGCCGAGCCCTCCGGTGTATATAGGAGCTAG 891 0.4422 MAIATETQPQQHKDSSEVSGSAAEQRRWTLNDFDIGKPLGRGKFGHVYLAREKTSNHIVALKVLFKSQLQQSQVVHQLRREVEIQSHLRHPHILRLYGYFYDQKRVYLILEYAPKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGSQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDASVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIIQVDLKFPPKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIVQNAEPSGVYRS* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0743 296 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 1 295 IPR030616 GO:0004672
Gso4g0743 296 Gene3D Phosphorylase Kinase; domain 1 20 116 - -
Gso4g0743 296 CDD STKc_Aurora 32 285 - -
Gso4g0743 296 PIRSF ILK 3 281 - -
Gso4g0743 296 SUPERFAMILY Protein kinase-like (PK-like) 23 288 IPR011009 -
Gso4g0743 296 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Gso4g0743 296 Gene3D Transferase(Phosphotransferase) domain 1 117 293 - -
Gso4g0743 296 ProSitePatterns Protein kinases ATP-binding region signature. 39 62 IPR017441 GO:0005524
Gso4g0743 296 SMART serkin_6 33 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g0743 296 MobiDBLite consensus disorder prediction 1 24 - -
Gso4g0743 296 PANTHER SERINE/THREONINE-PROTEIN KINASE AURORA-1 1 295 - -
Gso4g0743 296 ProSiteProfiles Protein kinase domain profile. 33 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g0743 296 Pfam Protein kinase domain 35 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0743 Gso-Chr4 7372855 7375599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0743 24 295 CBL-interacting serine-threonine protein kinases AT5G10930 35.125 5.04e-56 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Gso4g0743 Pkinase 1.3e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0743 K08850 - gmx:100775451 596.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0743 4 7372855 7375599 Gso6g0749 6 6925871 6928513 GST