Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0732 ATGCCTGAGCTGCGTTCCCGGCCACACATAAGCCGCCTTGTAGACAGCGCAAACGCCAATCCGACCACTCAGCCAGCCTCGCCGCCGGCCGCCGGAGCCTGTCGAAGGAAGCCAGCCGTCGCCGCCGCTCCGACCGGGAGGAATCGCAGGCTGAACAACGCGATTGCCGTCGCCGCCGATCAAATCCTGAACGCCGAAGACGAAGGTGGTGCCGTTCGTGGAACCAGAGCGAGGAAGCTGAAACAAGATCAAGGAGTGAAGGAGAATATTAAAAATAAGAAGGTTTCAGTTAGGGTTTTGGAAGTGGAAGGCATGGATGAGTACGATAGTGGTAGCCGCAGTGCCGATAAGGCTCCCGGAGCTGAAGACGAAGGCACCACACCTCCTATTCCAGAGAAGGTTCAGGTTGGTGGTTCCCCATTGTACAGAGTTGAGAGAAAACTTGGGAAAGGAGGATTTGGGCAGGTTTATGTTGGTCGGCTGCTCGGAGCTGCGAATTCTAGTGAACGAACTGGTGCTGGGGCTGTTGAGGTAGCCTTAAAATTTGAGCATAGAAGCAGCAAAGGGTGCAATTATGGACCTCCATATGAGTGGCAGGTTTACAATGCACTAGGTGGTAGTCATGGTGTTCCGCAAGCTCATTATAAGGGACGGCAAGGTGACTACTATATTATGGTCATGGATATACTTGGCCCTAGTCTGTGGGACGTTTGGAATAACAACAATCCTCACATGATGTCTACTGAAATGGTTGCATGTATTGCAATCGAGGCTATCTCCATATTAGAGAAGATGCATTCTAGAGGATATGTACACGGTGATGTAAAACCTGAGAACTTTTTGCTTGGACTCCCTGGAACTCTTGATGAAAAGAAGTTGTTTCTGGTTGATCTTGGATTAGCAACTCGGTGGCGTGATAGTTCGACTGGCCTTCATGTTGACTATGATCAACGTCCAGATGTTTTTAGGGGCACAGTTCGTTATGCTAGCGTGCATGCCCATCTTGGTAGAACAGGTAGCAGGAGAGATGACTTGGAATCTCTTGCTTACACTCTTGTCTTTCTTCTTCGTGGTCGGCTACCTTGGCAAGGATACCAGGGAGAAAATAAAGGGTTTCTTGTCTGCAAGAAAAAGATGGCCACTTCTCCAGAAACTTTGTGTTGCTTTTGTCCTCAACCATTTCGACAATTTGTTGAATATGTGGTGAATTTGAAGTTTGATGAAGAACCAAATTATGCAAAATATATATCCCTTTTCGATGGAATTGTGGGCCCAAATCCAGATATCAGGCCAATAAACACTGAAGGTGCTCAGAAGCTTATATGTCAGGTTGGACATAAGAGGGGGCGATTGACCATAGAAGAAGATGATGATGAACAACCAAATAAGAAGGTTCGAATGGGAATGCCTGCTACACAATGGATTAGTGTTTACAATGCTCGTCGACCAATGAAGCAAAGGTATCATTATAATGTTGCTGATGTGCGGCTGGCCCAACACATTGATAAAGGAAATGAAGATGGTTTATTTATCAGCAGTGTGGCTTCTTGTTCTAATCTTTGGGCACTCATTATGGATGCTGGCACTGGTTTCACCGCACAAGTTTATGAACTGTCTCCCCACTTCCTTCACAAGGAATGGATTATGGAACAGTGGGAGAAGAATTATTACATTAGTGCCATAGCTGGGGTTAATAATGGATCCTCATTGGTTGTAATGTCTAAAGGTACCCAGTACTTACAGCAATCCTATAAAGTCAGTGATTCGTTTCCATTTAAATGGATCAACAAAAAGTGGAGAGAAGGATTTTATGTCACTGCTATGGCCACTGCCGGCTCTAGATGGGCAATTGTTATGTCCCGTGGGGCTGGTTTTTCAGACCAGGTTGTGGAACTTGATTTCTTGTATCCCAGTGAAGGCATTCATCGAAGGTGGGATAGTGGTTATCGCATCACCTCAACTGCTGCAACATGGGACCAAGCTGCTTTTGTTCTTAGTGTCCCAAGAAGAAAACCAGCTGATGAAACTCAGGAGACACTCCGCACATCTGCTTTTCCTGGTACTCATGTCAAGGAAAAATGGGCTAAGAACCTCTATATCGCATCTATTTGTTATGGGAGAACAGTGTCATAA 2133 0.4604 MPELRSRPHISRLVDSANANPTTQPASPPAAGACRRKPAVAAAPTGRNRRLNNAIAVAADQILNAEDEGGAVRGTRARKLKQDQGVKENIKNKKVSVRVLEVEGMDEYDSGSRSADKAPGAEDEGTTPPIPEKVQVGGSPLYRVERKLGKGGFGQVYVGRLLGAANSSERTGAGAVEVALKFEHRSSKGCNYGPPYEWQVYNALGGSHGVPQAHYKGRQGDYYIMVMDILGPSLWDVWNNNNPHMMSTEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGLPGTLDEKKLFLVDLGLATRWRDSSTGLHVDYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLVFLLRGRLPWQGYQGENKGFLVCKKKMATSPETLCCFCPQPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPINTEGAQKLICQVGHKRGRLTIEEDDDEQPNKKVRMGMPATQWISVYNARRPMKQRYHYNVADVRLAQHIDKGNEDGLFISSVASCSNLWALIMDAGTGFTAQVYELSPHFLHKEWIMEQWEKNYYISAIAGVNNGSSLVVMSKGTQYLQQSYKVSDSFPFKWINKKWREGFYVTAMATAGSRWAIVMSRGAGFSDQVVELDFLYPSEGIHRRWDSGYRITSTAATWDQAAFVLSVPRRKPADETQETLRTSAFPGTHVKEKWAKNLYIASICYGRTVS* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0732 710 ProSiteProfiles Protein kinase domain profile. 142 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g0732 710 MobiDBLite consensus disorder prediction 13 27 - -
Gso4g0732 710 SMART serkin_6 142 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g0732 710 MobiDBLite consensus disorder prediction 104 120 - -
Gso4g0732 710 PANTHER CASEIN KINASE-RELATED 88 684 - -
Gso4g0732 710 Coils Coil 48 68 - -
Gso4g0732 710 ProSitePatterns Protein kinases ATP-binding region signature. 148 181 IPR017441 GO:0005524
Gso4g0732 710 CDD STKc_CK1 142 419 - -
Gso4g0732 710 Pfam Protein kinase domain 142 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g0732 710 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 34 - -
Gso4g0732 710 MobiDBLite consensus disorder prediction 104 136 - -
Gso4g0732 710 PANTHER - 88 684 - -
Gso4g0732 710 SUPERFAMILY Protein kinase-like (PK-like) 142 423 IPR011009 -
Gso4g0732 710 MobiDBLite consensus disorder prediction 1 49 - -
Gso4g0732 710 Gene3D Transferase(Phosphotransferase) domain 1 112 460 - -
Gso4g0732 710 ProSitePatterns Serine/Threonine protein kinases active-site signature. 270 282 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0732 Gso-Chr4 7266538 7273039 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0732 224 419 MAP Kinase Kinase Kinase AT5G50180 25.628 5.89e-10 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Gso4g0732 Pkinase 2e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0732 - - gmx:100779382 1457.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0732 4 7266538 7273039 Gso6g0738 6 6815742 6820391 GST
Gso4g0732 4 7266538 7273039 Gso16g0338 16 3837097 3844923 PCT