Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0731 ATGCCTGAGCTGCGTTCCCGGCCACGCAGAAACCGCCTTGTAGATAACGCAAACGCCGATGAAATCGTGAGCGTTCGTGGAACCAGAGCGAGGAAGCTGAAAGACGATCAAGGAGTGAAGGAGAATATTAATAAGAAGAAGGTTTCTGGTAGGGTTTTGGAAGTGGAAGGCATGAATGAGTACGATAGTGGTGGCCGCAGTGCTGATAAGGCTCCCGAAGCTGAAGACGAAGGCACCACACCTCCTATTCCAGAGAAGGTTCAAGTTGGTGGTTCCCCATTGTACAGAGTTGAGAGAAAACTTGGGAAAGGAGGATTTGGGCAGGTTTATGTTGGTCGGCGGCTAGGAGCTGCGAATTCTAATGAACGAGCTGGTGCCGGTGCTGTTGAGATAGCCTTAAAATTTGAGCATAGAAGCAGCAAAGGGTGCAATTATGGACCCCCACATGAGTGGCAGGTTTACAATGCATTAGGTGGTAGTCATGGTGTTCCGCGAGTTCATTATAAGGGACGGCAAGGTGACTACTATATTATGGTCATGGATATACTTGGCCCTAGTCTGTGGGACGTTTGGAATAACAACAATCCTCACATGATGTCTACTGAAATGGTTGCATGTATTGCAATCGAGGCTATCTCCATATTAGAGAAGATGCATTCTAGAGGATATGTGCACGGTGATGTAAAACCTGAGAACTTTTTGCTTGGACCCCCTGGAACTCCTAATGAAAAGAAGTTGTTTCTGGTTGATCTTGGATTAGCAACTCGGTGGCGTGATAGTTCAACTGGCCTTCATGTTGAATATGATCAACGTCCAGATGTTTTTAGGGGCACAGTTCGTTATGCTAGCGTGCATGCTCATCTTGGTAGAACAGGTAGTAGGAGAGATGACTTAGAATCTCTTGCTTACACTCTTGTCTTTCTTCTTCGGGGTAGGCTACCTTGGCAAGGATATCAGGGAGAAAATAAAGGATTTCTTGTCTGCAAGAAAAAGATGGCCACTTCTCCTGAAACTTTGTGTTGCTTGTGTCCTCAACCATTTCGGCAATTTGTTGAATATGTAGTGAATTTGAAGTTTGATGAAGAACCAAATTATGCAAGATATATATCCCTTTTCGATGGAATTGTGGGCCCAAATCCAGATATCAGGCCAATAAACACTGAAGGTGCTCAGAAGCTTATATGTCAGGTTGGACATAAGAGGGGGCGATTGACCATAGAAGAAGATGATGATGAACAACCAAATAAGAAGGTTCGAATGGGAATGCCTGCTACACAATGGATTAGTGTTTACAATGCTCGTCGACCAATGAAGCAAAGGTATCATTATAATGTTGCTGATGTGCGGCTGGCCCAACACATTGATAAAGGAAATGAAGATGGTTTATTTATCGGCAGTGTGGCTTCTTGTTCTAATCTTTGGGCACTCATTATGGATGCTGGCACTGGTTTCACCGCACAAGTTTATGAACTCTCTCCCCACTTCCTTCACAAGGAATGGATTATGGAACAGTGGGAGAAGAATTATTACATTAGTGCCATAGCCGGGGCTAATAATGGATCCTCATTGGTTGTAATGTCTAAAGGTACCCAGTACTTACAGCAATCCTATAAAGTCAGTGATTCGTTTCCATTTAAGTGGATCAACAAAAAATGGAGAGAAGGATTTTATGTCACTGCTATGGCCACTGCCGGCTCAAGATGGGCAATTGTTATGTCCCGTGGGGCTGGTTTTTCGGACCAGGTTGTGGAACTTGATTTCTTGTATCCCAGTGAAGGTATTCATCGAAGGTGGGATAGTGGTTATCGCATCACCTCAACTGCTGCAACATGGGACCAAGCTGCTTTTGTTCTTAGTGTCCCAAGAAGAAAACCAGCTGATGAAACTCAGGAGACACTCCGCACATCTGCTTTTCCTGGTACTCATGTCAAGGAAAAATGGGCAAAGAACCTCTATATTGCATCTATTTGTTATGGGAGAACAGTGTCTTAA 1992 0.4423 MPELRSRPRRNRLVDNANADEIVSVRGTRARKLKDDQGVKENINKKKVSGRVLEVEGMNEYDSGGRSADKAPEAEDEGTTPPIPEKVQVGGSPLYRVERKLGKGGFGQVYVGRRLGAANSNERAGAGAVEIALKFEHRSSKGCNYGPPHEWQVYNALGGSHGVPRVHYKGRQGDYYIMVMDILGPSLWDVWNNNNPHMMSTEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPGTPNEKKLFLVDLGLATRWRDSSTGLHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLVFLLRGRLPWQGYQGENKGFLVCKKKMATSPETLCCLCPQPFRQFVEYVVNLKFDEEPNYARYISLFDGIVGPNPDIRPINTEGAQKLICQVGHKRGRLTIEEDDDEQPNKKVRMGMPATQWISVYNARRPMKQRYHYNVADVRLAQHIDKGNEDGLFIGSVASCSNLWALIMDAGTGFTAQVYELSPHFLHKEWIMEQWEKNYYISAIAGANNGSSLVVMSKGTQYLQQSYKVSDSFPFKWINKKWREGFYVTAMATAGSRWAIVMSRGAGFSDQVVELDFLYPSEGIHRRWDSGYRITSTAATWDQAAFVLSVPRRKPADETQETLRTSAFPGTHVKEKWAKNLYIASICYGRTVS* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0731 663 MobiDBLite consensus disorder prediction 55 85 - -
Gso4g0731 663 CDD STKc_CK1 95 372 - -
Gso4g0731 663 Pfam Protein kinase domain 95 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g0731 663 ProSitePatterns Protein kinases ATP-binding region signature. 101 134 IPR017441 GO:0005524
Gso4g0731 663 SUPERFAMILY Protein kinase-like (PK-like) 95 376 IPR011009 -
Gso4g0731 663 SMART serkin_6 95 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g0731 663 ProSiteProfiles Protein kinase domain profile. 95 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g0731 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
Gso4g0731 663 PANTHER - 51 637 - -
Gso4g0731 663 PANTHER CASEIN KINASE-RELATED 51 637 - -
Gso4g0731 663 MobiDBLite consensus disorder prediction 66 80 - -
Gso4g0731 663 Gene3D Transferase(Phosphotransferase) domain 1 64 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0731 Gso-Chr4 7255838 7264037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0731 177 372 MAP Kinase Kinase Kinase AT5G50180 25.126 1.44e-09 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Gso4g0731 Pkinase 1.6e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0731 - - gmx:100778855 1371.3