Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0726 ATGGCCAAAGGATCTTATTCAATATCTTCAAAGGCAAGATCCATGAAATTTATATTCCTCTTCATGTTCATGCTCAACTTCATCTTATCCGATGGAGATCAACATGAGGTTCAGCTTCTCTTGTCCTTCAAAGCTTCTCTCCACGACCCACTTCATTTTCTCTCCAACTGGGTCAGTTTCACTTCCTCTGCCACTATCTGCAAGTGGCACGGCATCAACTGCGACAACAACGCTAACTCTTCCCACGTTAACGCTGTGGTGCTCTCAGGAAAAAACATAACCGGTGAGGTATCCTCTTCCATTTTTCAGCTTCCCTACCTCACAAACCTCGACCTTTCCAATAACCAGCTTGTTGGGGAAATCACTTTTACCCACTCTCACAATTCTCTGTCTCAAATCCGTTACCTTAACCTCAGCAACAACAACCTCACGGGCTCTCTGCCTCAACCCTTGTTTTCAGTGCTTTTCTCAAACCTCGAAACACTTGATCTCTCGAACAACATGTTTTCGGGGAACATACCCGACCAAATTGGATTGCTTTCAAGCCTGAGGTATCTTGATCTCGGAGGAAACGTTCTGGTTGGAAAGATTCCAAATTCCATCACCAACATGACCGCTTTGGAATACCTTACTTTGGCTTCAAACCAGTTAGTGGATAAGATACCAGAAGAAATCGGAGCAATGAAGAGCTTGAAGTGGATTTACTTAGGCTACAACAACCTCTCAGGTGAGATTCCAAGTAGCATTGGAGAGTTACTCTCTTTGAATCACCTCGATCTTGTTTACAACAACCTCACTGGACTTATTCCTCACTCTCTCGGACACCTCACCGAGCTTCAGTATCTCTTTCTCTACCAAAACAAACTAAGTGGTCCAATTCCAGGATCTATCTTCGAGCTCAAAAAGATGATTTCTCTCGATCTAAGTGATAACTCTCTTTCGGGTGAGATTTCCGAGCGTGTGGTTAAGCTCCAGAGCCTGGAGATTCTCCACCTTTTCTCAAACAAGTTCACTGGGAAGATTCCAAAGGGTGTTGCATCTTTGCCTAGGCTTCAGGTTCTTCAGCTATGGTCAAACGGATTAACAGGTGAGATTCCTGAGGAGCTAGGGAAGCATAGTAACCTCACTGTGTTGGACCTCTCCACCAACAACCTCTCAGGGAAGATTCCAGATAGCATATGTTATTCTGGTAGTCTTTTCAAGCTTATCCTCTTCTCCAACTCCTTCGAAGGAGAGATTCCAAAGAGCTTAACCTCTTGCAGAAGCCTTCGCCGTGTTAGACTCCAAACCAACAAATTCTCCGGGAATTTACCATCGGAGTTATCCACGCTGCCTCGGGTATACTTCTTGGATATCTCTGGTAACCAACTTTCTGGAAGAATCGATGACAGAAAATGGGATATGCCGTCACTTCAAATGCTGAGTTTAGCAAACAACAACTTCTCAGGAGAAATCCCAAACTCTTTTGGTACTCAAAATCTTGAGGACTTGGACTTGTCATATAACCATTTCTCAGGTTCTATTCCACTTGGTTTCAGAAGTTTGCCAGAGCTTGTGGAATTGATGCTCAGCAATAACAAACTCTTCGGTAACATCCCTGAAGAAATTTGCTCGTGCAAGAAGCTTGTGTCCTTAGACTTGAGTCAGAACCAGCTCAGTGGTGAGATTCCGGTGAAGCTCTCAGAGATGCCGGTTCTCGGCCTCCTCGACCTGTCGCAAAACCAATTCTCCGGCCAGATTCCGCAGAATCTGGGAAGCGTGGAGTCTCTCGTTCAAGTGAACATATCACACAACCATTTTCATGGAAGCTTACCTTCCACCGGCGCTTTTCTTGCCATCAACGCGAGTGCAGTCATTGGCAATAACCTTTGTGACCGCGACGGTGACGCTTCAAGCGGTTTGCCACCGTGCAAAAACAACAATCAGAACCCAACTTGGCTCTTCATCATGCTGTGTTTTCTACTAGCGTTGGTTGCGTTCGCAGCAGCTTCTTTTCTCGTCTTATACGTTCGCAAGAGGAAGAACTTCTCGGAGGTGCGAAGAGTGGAAAACGAAGACGGAACGTGGGAAGTGAAATTTTTTTATTCCAAAGCCGCAAGGTTGATCAATGTAGACGATGTTTTGAAAACGGTTAAAGAAGGAAAAGTTGTGTCGAAAGGAACAAACTGGGTTTGGTACGAAGGGAAGTGCATGGAAAACGACATGCAGTTCGTGGTGAAGGAAATCAGCGACTTGAATTCACTTCCATTGAGTATGTGGGAAGAGACAGTAAAAATTAGAAAGGTTCGTCACCCGAATATCATTAACCTTATTGCGACGTGTAGGTGTGGGAAGAGAGGGTACTTGGTGTACGAGCACGAGGAGGGGGAGAAGTTAAGCGAAATTGTCAACAGTTTAAGTTGGCAACGGCGTTGCAAAATCGCCGTTGGCGTGGCAAAAGCACTTAAGTTCTTGCATTCTCAAGCTTCATCCATGCTTTTGGTTGGAGAGGTGTCACCGGAGATAGTTTGGGTCGACGCTAAGGGCGTCCCTCGCCTTAAGGTCACCCCTCCCCTAATGCCGTGTTTGGATGTCAAGGGTTTCGTTTCTTCGCCCTACGTTGCTCAAGAGGTAATAGAGAGGAAAAATGTGACGGAGAAGAGTGAGATATATGGGTTCGGAGTGATGCTGGTTGAATTATTGACGGGAAGGAGCGCCATGGACATAGAAGCTGGCAATGGCATGCATAAAACCATTGTGGAGTGGGCCCGCTATTGCTACTCTGACTGTCATCTTGACACGTGGATAGATCCTGTGATGAAGGGTGGAGATGCATTGAGATATCAGAACGACATTGTTGAGATGATGAATCTTGCACTGCATTGTACCGCTACTGATCCCACCGCAAGGCCATGCGCAAGAGACGTACTCAAAGCCCTAGAGACTGTTCACAGAACCACTTTTTGTTGA 2949 0.4574 MAKGSYSISSKARSMKFIFLFMFMLNFILSDGDQHEVQLLLSFKASLHDPLHFLSNWVSFTSSATICKWHGINCDNNANSSHVNAVVLSGKNITGEVSSSIFQLPYLTNLDLSNNQLVGEITFTHSHNSLSQIRYLNLSNNNLTGSLPQPLFSVLFSNLETLDLSNNMFSGNIPDQIGLLSSLRYLDLGGNVLVGKIPNSITNMTALEYLTLASNQLVDKIPEEIGAMKSLKWIYLGYNNLSGEIPSSIGELLSLNHLDLVYNNLTGLIPHSLGHLTELQYLFLYQNKLSGPIPGSIFELKKMISLDLSDNSLSGEISERVVKLQSLEILHLFSNKFTGKIPKGVASLPRLQVLQLWSNGLTGEIPEELGKHSNLTVLDLSTNNLSGKIPDSICYSGSLFKLILFSNSFEGEIPKSLTSCRSLRRVRLQTNKFSGNLPSELSTLPRVYFLDISGNQLSGRIDDRKWDMPSLQMLSLANNNFSGEIPNSFGTQNLEDLDLSYNHFSGSIPLGFRSLPELVELMLSNNKLFGNIPEEICSCKKLVSLDLSQNQLSGEIPVKLSEMPVLGLLDLSQNQFSGQIPQNLGSVESLVQVNISHNHFHGSLPSTGAFLAINASAVIGNNLCDRDGDASSGLPPCKNNNQNPTWLFIMLCFLLALVAFAAASFLVLYVRKRKNFSEVRRVENEDGTWEVKFFYSKAARLINVDDVLKTVKEGKVVSKGTNWVWYEGKCMENDMQFVVKEISDLNSLPLSMWEETVKIRKVRHPNIINLIATCRCGKRGYLVYEHEEGEKLSEIVNSLSWQRRCKIAVGVAKALKFLHSQASSMLLVGEVSPEIVWVDAKGVPRLKVTPPLMPCLDVKGFVSSPYVAQEVIERKNVTEKSEIYGFGVMLVELLTGRSAMDIEAGNGMHKTIVEWARYCYSDCHLDTWIDPVMKGGDALRYQNDIVEMMNLALHCTATDPTARPCARDVLKALETVHRTTFC* 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0726 982 Gene3D Phosphorylase Kinase; domain 1 685 786 - -
Gso4g0726 982 ProSiteProfiles Leucine-rich repeat profile. 158 180 IPR001611 GO:0005515
Gso4g0726 982 PRINTS Leucine-rich repeat signature 107 120 - -
Gso4g0726 982 PRINTS Leucine-rich repeat signature 130 143 - -
Gso4g0726 982 Gene3D Transferase(Phosphotransferase) domain 1 787 980 - -
Gso4g0726 982 PANTHER - 10 980 - -
Gso4g0726 982 Pfam Leucine Rich repeat 538 555 IPR001611 GO:0005515
Gso4g0726 982 Pfam Leucine rich repeat 469 528 IPR001611 GO:0005515
Gso4g0726 982 Pfam Leucine rich repeat 157 217 IPR001611 GO:0005515
Gso4g0726 982 Pfam Leucine rich repeat 349 408 IPR001611 GO:0005515
Gso4g0726 982 Pfam Leucine rich repeat 230 289 IPR001611 GO:0005515
Gso4g0726 982 SUPERFAMILY RNI-like 88 386 - -
Gso4g0726 982 Gene3D Ribonuclease Inhibitor 326 633 IPR032675 -
Gso4g0726 982 Gene3D Ribonuclease Inhibitor 156 248 IPR032675 -
Gso4g0726 982 ProSiteProfiles Protein kinase domain profile. 665 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g0726 982 SUPERFAMILY L domain-like 347 605 - -
Gso4g0726 982 Gene3D Ribonuclease Inhibitor 35 155 IPR032675 -
Gso4g0726 982 Gene3D Ribonuclease Inhibitor 254 325 IPR032675 -
Gso4g0726 982 ProSiteProfiles Leucine-rich repeat profile. 374 396 IPR001611 GO:0005515
Gso4g0726 982 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 10 980 - -
Gso4g0726 982 SUPERFAMILY Protein kinase-like (PK-like) 712 977 IPR011009 -
Gso4g0726 982 Pfam Leucine rich repeat N-terminal domain 34 75 IPR013210 -
Gso4g0726 982 Pfam Protein kinase domain 719 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g0726 982 SMART LRR_typ_2 515 539 IPR003591 -
Gso4g0726 982 SMART LRR_typ_2 373 396 IPR003591 -
Gso4g0726 982 SMART LRR_typ_2 204 228 IPR003591 -
Gso4g0726 982 SMART LRR_typ_2 130 154 IPR003591 -
Gso4g0726 982 SMART LRR_typ_2 468 492 IPR003591 -
Gso4g0726 982 SMART LRR_typ_2 252 275 IPR003591 -
Gso4g0726 982 SMART LRR_typ_2 104 125 IPR003591 -
Gso4g0726 982 SMART LRR_typ_2 348 372 IPR003591 -
Gso4g0726 982 SMART LRR_typ_2 156 180 IPR003591 -
Gso4g0726 982 SMART LRR_typ_2 276 300 IPR003591 -
Gso4g0726 982 SMART LRR_typ_2 563 587 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0726 Gso-Chr4 7191428 7195732 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0726 20 974 Receptor kinase-like Gene Family AT2G25790 52.228 0.0 916
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Singleton Gso4g0726 Pkinase 2.6e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0726 - - gmx:100776180 1924.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0726 4 7191428 7195732 Gso6g0731 6 6768363 6772642 GST