Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0706 ATGGAGAGGGTTATCGGCGGGAAGTTTAAGATTGGTCGGAAAATCGGAAGCGGTTCGTTCGGAGAAATTTATATTGCATCAAATATGGATACCTCTGAGATTGTCGCCATCAAGATGGAAAGCAAGAAGACCAAACATCCACAGCTATTGTATGAAGCAAAGTTATATAGTATTCTTCAAGGAGAAAGTGGTATTCCAAGTATGAAGTGGTGTGGCACTGATGGAGACAATAATGTTCTAGTTATTGATCTTCTGGGACGGAGTCTTGAAGACTTTTTTGTCTACTGTGGGAGGAAGTTTTCATTAAAAACAGTTTTGATGTTGGCCGATCAGATGCTGACAAGAATAGAGTGCATGCATTCCAAGGGATTTTTGCATAGAGACATAAAACCAGATAACTTCCTTATGGGTCTTGGGAGGAAATCAAATCAGGTTTATATTATTGATTTTGGACTAGCAAAAAGATATAGGGACCCTAACACAAACAAACATATTCCTTACAGAGAGAATAAAAGCTTAACAGGAACTGCACGTTATGCAAGTTGTAACACTCACATGGGAATTGAGCAAAGTCGTCGGGATGATTTGGAGTCTCTTGGCTATGTTCTTATGTACTTTTTAAGAGGAAGCCTTCCTTGGCAGGGTTTGAAAGCTGCCACCAAAAAGGAAAAATATGACAATATCTGTGAGAAGAAATTATCAACTCCCATTGGGATGCTTTGCAAGTCATATCCTGCGGAGTTTGCTAGTTACTTTCACTATTGCCAATCTTTAACATTTGATCAACACCCAGATTATGGATACTTGAAGCGCTTGTTCCGTGATTTGTTCAAAAGAGAAGGATATGATTCTGACTATATATTTGACTGGACCATCCTAAAATATCAGCAGGCGCAACAGACAAAGAAACAAAATCAATCATCTCCTTCAACTGCAGTGCCTAGCAGTCTAGAACCAGTAGTTGTGGAAAAACATAAAGGAGTCAATGATTCAGCTCATGTTACTGTAACAAAAATGTTGGCCAATCTCGAACGTCCAAGTGCACCACGTGTGCAGCCTAAGCCATCTAATGTTCAGAATCTGGATGCCAAGAATCATATTGAGAAACATGGTGTGAACAATAGTCCATCTACTTCCTCTGCCACTCCCAAATCCTCTACAGTAAATGCCTCGAAACCAGAAAGGCCCGCAGGAACCTCAAACCTTGGTCGTGTATTTGGGAGTAATGCCCGTGTTTCAAGCAGCTGGATTCCTTCACTACGCCGAATTTCTTCTGCCAAATAG 1284 0.4058 MERVIGGKFKIGRKIGSGSFGEIYIASNMDTSEIVAIKMESKKTKHPQLLYEAKLYSILQGESGIPSMKWCGTDGDNNVLVIDLLGRSLEDFFVYCGRKFSLKTVLMLADQMLTRIECMHSKGFLHRDIKPDNFLMGLGRKSNQVYIIDFGLAKRYRDPNTNKHIPYRENKSLTGTARYASCNTHMGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAATKKEKYDNICEKKLSTPIGMLCKSYPAEFASYFHYCQSLTFDQHPDYGYLKRLFRDLFKREGYDSDYIFDWTILKYQQAQQTKKQNQSSPSTAVPSSLEPVVVEKHKGVNDSAHVTVTKMLANLERPSAPRVQPKPSNVQNLDAKNHIEKHGVNNSPSTSSATPKSSTVNASKPERPAGTSNLGRVFGSNARVSSSWIPSLRRISSAK* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0706 427 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Gso4g0706 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Gso4g0706 427 Gene3D Transferase(Phosphotransferase) domain 1 1 338 - -
Gso4g0706 427 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 411 - -
Gso4g0706 427 Pfam Protein kinase domain 10 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g0706 427 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g0706 427 MobiDBLite consensus disorder prediction 370 414 - -
Gso4g0706 427 SMART serkin_6 9 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g0706 427 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Gso4g0706 427 PANTHER CASEIN KINASE-RELATED 1 411 - -
Gso4g0706 427 MobiDBLite consensus disorder prediction 368 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0706 Gso-Chr4 6945777 6951987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0706 9 236 AGC Kinase Gene Family AT3G08720 26.724 9.07e-16 77.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Gso4g0706 Pkinase 6.7e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0706 K08960 K08959 gmx:100810377 845.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0706 4 6945777 6951987 Gso6g0709 6 6536871 6542717 GST