Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0697 ATGGAACAGAGCGAAACGGCGTCGGATTTAGCTCCAAGGAAATTGGCTCGCCAATTGGATTTCGCGGCCGTTTACGGAGATCCGTCGCACCAGAAACTGCCTCCACCGTTGCCGCCTCCACAGTCACCGTTGCGTCCGCCGTCGCATTCTCCGTTGCGATTGCAGTTGGATTTGCAGCCGCCGGGGCAACGGCCGTGGTTATATTCAGAGGCGCAGGAACAACAGCCGGGGTTGTATTCACCGCGGCCGAAGCTAGTTTCGCCGGTTAGACGAATTCCGCACCCCGTGGTGAAGTTTCCGGTGAAGGTGTTGCAAGTGGTAAAGCCAGAGTCTCCCAGATCACAACCTCGATGTAATGTGGAATTGAAGGACACCACTCCAAAGAAACAGAAACAATGTAACTGCAAAAATTCTAGATGCCTCAAGTTGTACTGTGAGTGCTTTGCAGCTGGGATCTATTGTGATGGCTGCAACTGTGTAAATTGCCATAATAATGTGGATAATGAGGCTGCCAGACAGGAGGCAGTTGGAATAACATTGGAACGCAATCCAAATGCTTTCAGACCAAAAATTGCTAGCAGTCCACAAGAACAAAGAGATTCCAAGGAATGTGAAATTAAAGTAATAGGAAAGCACAATAAAGGATGTCACTGCAAGAAATCAGGCTGCCTTAAGAAGTATTGTGAGTGCTTCCAAGCCAATATCCTCTGCTCTGAAAATTGTAAATGCATGGACTGCAAGAATTTTGAAGGAAGTGATGAAAGAATAGCAATATTTCACAAAGATTACAATCTAGTTCACATGAAACAGGCAGCTAATGCTACCATTAGTGGAGCTGTTGGATCATCTGGCTATGGAACCCATATAACACCCAAGAAGAGAAAAAATCAGGAAATGTTTCCTGGAAAGTCAGCCATGGATCAAACTGTTAACATGACTGCTCAATACCTACAGGAAATTGATCCTATGGCTTCATCGCCATCATCTCTGTCAGATTCCTTTATTTCTGACCCTTCCAACACAAGAATTTCAGGGTCTTCAAGATCTACATACCGGTCCGTATTGGCAGATGTCCTCAAGCCAAATAATGTAAAGAATCTCTGTTCACTTTTTGTTGTTCTCTCACGAGTAGCTGCAAAGACAAATGCAGAAATGAGAGGCAAAGTAGACCAGCAAACAAAAACTGGGAACTTTGAAGCTTCTGTTGCTTCATCAGCTAAATCACTGCAAGAAACTAGAGATGTCCACCAGCCTGCTTGTGATGATCATGTGAATAAAGATGAAGCAGAAGCAGTTGATGTCGCTCATTATAATAGGCCATTATCACCTGAAACACTAGCATTGATGTGTGATGAACAGGATGATATGCTTTTTGGAAATTGTTCTGCAGATGGAGTTGCATGCAACAGTACTTTTCAAAACATGATTCAAAAGTCATTTAATTCTGATGGATGCACTGATGTTTACAGAGAGCAGGAAAGGCTTATATTGACCAAGTTCTTGGACATTCTTCGCGGACTCGTTACTCATGGCAGCATCAAAGAAACAATGTGCTCTTCATTGACCAAGAAAGGGGAGAGAAGCAAGAAAGAACCTGCAGACAATGGCAATAATGGTGCTGAAACTAACGTTGGGAGTGAGAAGGGAATTCAAAGCAACTGCTTTGCAAATTACCTCATCCCATCGATCGCTAAAATATCCCAGACAAATTATGCCATAACCAATGGACATGGTAATAATGATCTTTCGTTGACCTGA 1758 0.4357 MEQSETASDLAPRKLARQLDFAAVYGDPSHQKLPPPLPPPQSPLRPPSHSPLRLQLDLQPPGQRPWLYSEAQEQQPGLYSPRPKLVSPVRRIPHPVVKFPVKVLQVVKPESPRSQPRCNVELKDTTPKKQKQCNCKNSRCLKLYCECFAAGIYCDGCNCVNCHNNVDNEAARQEAVGITLERNPNAFRPKIASSPQEQRDSKECEIKVIGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSDERIAIFHKDYNLVHMKQAANATISGAVGSSGYGTHITPKKRKNQEMFPGKSAMDQTVNMTAQYLQEIDPMASSPSSLSDSFISDPSNTRISGSSRSTYRSVLADVLKPNNVKNLCSLFVVLSRVAAKTNAEMRGKVDQQTKTGNFEASVASSAKSLQETRDVHQPACDDHVNKDEAEAVDVAHYNRPLSPETLALMCDEQDDMLFGNCSADGVACNSTFQNMIQKSFNSDGCTDVYREQERLILTKFLDILRGLVTHGSIKETMCSSLTKKGERSKKEPADNGNNGAETNVGSEKGIQSNCFANYLIPSIAKISQTNYAITNGHGNNDLSLT* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0697 585 MobiDBLite consensus disorder prediction 519 544 - -
Gso4g0697 585 MobiDBLite consensus disorder prediction 328 347 - -
Gso4g0697 585 PANTHER TESMIN/TSO1-RELATED 1 562 IPR028307 -
Gso4g0697 585 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 1 562 - -
Gso4g0697 585 MobiDBLite consensus disorder prediction 31 47 - -
Gso4g0697 585 MobiDBLite consensus disorder prediction 520 534 - -
Gso4g0697 585 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 214 248 IPR005172 -
Gso4g0697 585 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 130 165 IPR005172 -
Gso4g0697 585 MobiDBLite consensus disorder prediction 21 59 - -
Gso4g0697 585 SMART CXC_2 128 168 IPR033467 -
Gso4g0697 585 SMART CXC_2 211 252 IPR033467 -
Gso4g0697 585 ProSiteProfiles CRC domain profile. 129 251 IPR005172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0697 Gso-Chr4 6818273 6824367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0697 109 570 CPP Transcription Factor Family AT4G29000 48.255 2.26e-131 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Gso4g0697 TCR 3.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0697 - K21776 gmx:100811459 1130.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0697 4 6818273 6824367 Gso6g0701 6 6448139 6453843 GST