Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0689 ATGGAAGGTGACCAGACAATCCTTGCTGCATCAGAAGGGGTGATAGAAGGTGTTCAGAAAATTAGATCTCTGAATGGGAGGACTACTGGCCCTACAAGGCGCTCTACAAAAGGACAATGGACACCTGAAGAGGACGAGATTTTGCGGAAGGCTGTTCAGCGTTTCAAAGGAAAGAACTGGAAAAAAATAGCGGAGTGTTTCAAGGATAGAACTGATGTACAATGCTTGCATAGGTGGCAGAAAGTCTTAAATCCAGAACTCGTCAAAGGTCCATGGTCTAAAGAGGAGGATGAAATAATTATTGATTTGGTGAATAGATATGGACCTAAAAAGTGGTCTACTATCGCACAACACTTACCTGGACGTATTGGTAAGCAATGTCGAGAAAGGTGGCATAATCATCTTAATCCTACTATAAATAAGGAAGCATGGACGCAAGAAGAGGAGTTGGCTCTTATACGCGCACATCAGATTTATGGGAACAGATGGGCAGAATTAGCGAAGTTATTGCCTGGAAGGACAGACAATTCTATAAAAAACCATTGGAATAGTTCTGTAAAAAAAAAATTGGATTCTTACTTGGCATCGGGCTTGCTTACTCAGTTACAAAATGTACCACTTGTTGGAAATCCGAATCAACCTATTGCTTCCATCTCTTCGAGGTTGCAGCAGAGTGGAGACGATAATGGTCCTAGGGGGGCTGAAGGGGAGGAAGTTTCACAGAGTAGCCAGGAGTCAGCTAAAGCTGGTCACTTTTCGTCAGCCAGAGAGATGAGGAGTGTTGTTTTACAAACTGGAGAGGAATACAAACCAAATGAAAAACCTAGTCAAGCATCCTGTTCAGAGCCATATTACGTGTCTCTGGATGAAGTAACTGCATCCCTTCAAGACATGGCTGGCCAAGGGATTTGCACTTCTCAATTCATTGAACAGAAATATTCACACAAACCTAGAAACTCCACAAACGGGGACTGCCAGCTTGATTTACTTGACTTGACCCATATTTCCTCAATGGACTTTGGGCCGGAATCATCACAGTTGCAAAATGATAGGGTAGCTCCTAGTGAAAGTCCCGACATGGTGAATATTCCGTTTCAGACTTCGATGGGGTTAGGTGTTGCAACGACCATGGGATCTATATCTGTTAAACTAGAACACATATTGATGTCTGATGATGAATGTTGCAGAATCCTAATTTCAGAAGCAATAGGTGATGAATGCTTTTCTTCTGGAGATTATAATAAAGGTGTTAACATGGTTAACTTGTCAGGATGCACCTCATTTCTTTGTCAGTCATTACCATCTGTCCAATCAGTAGTTTCTTCTACTGGTGATAGGTTGACGTATACGGTCGAACCCAATCAGTTGGTTGGGTCTGAGGATCAGCAGTTTGTCTCCAGAACACAGGACAACATAATTTATGCCAATGACTTGTCCAGTTCTCCTTGTATCCATAGGATAGACAGCACAGAAATGCAAGAGCCATCAGATGTTGTGAAAGATGATTCAAAATTGGTCCCTGTAAATAGTTTTGGCTGTGGATCAGACGCTAAGCAAACTTCCTATCCAACGGATGAAAAGCCAAATGTGCCTACAGAACAAGAGGACACAGGTGCTCTATGTTATGAACCTCCCCGCTTTCCAAGCTTGGACATTCCTTTCTTAAGCTGTGATCTTATACAATCTGGAGGTGATATGCAGCAGGAATTCAGTCCCCTAGGTATCCGCCAATTTATGATGTCTTCTATGAACATGAACCTAACTCCTTTTAGATTATGGGACTCACCTTCTCGTGATGATAGTCCAGATGCTCTGTTAAAAAGTGCAGCTAAAACCTTCACAGGTACACCATCTATATTAAAGAAACGAAACCGAGACCTTTTATCTCCACTATCAGATAAAAGAATTGACAAGAGACTTGAGATTGAAATGACATCAACCTTGATAAAAAACTTTTCCCGATTGGATGTCATGTTTGACGACAATGAAACTCCGGTAGCAGATTTGCTTCCTGCATCTTCAATGCAAAAGAGGGACTCTGGTACCTCTGTTGAAGGTGATAAAGGGAGTTGTCGACAAGATTTAGTTAAAGTGGAACGAGCAGAGGATAAAAAGAAGTCTGTAATTTTGGACGACAAAAAATCAGAAGACGATTCGGGTGGTAATAATTCTCAGGATAAAGTTAAGCAGCAACCTCTTGATGTTGATTCTGAGATAAAGAATGATGCTAGTGCTGCTGCTGAGATTGTGCAACAACCATCTGAAATTTTGGTTGAACATGATATGAATGATCTGTTACTGTATTCACCTGATCAGGTTAATTTGAAATCAGAAAAAGTTCTTAGTTTAAGTGCTAGAACTAAAAAAAATCCATGCTCAAGGATTAACTCACCATCTGTTTGGGTAAAGGAGCATGAAAGACTTTCAGTTGCTGTTACTTGTGTACAGTCTATCAGTTCATCCGGCTCAGGGGAGAATTCGGGTGATCACACTGGAAACGATGGTGGTCTTGAAACATGTAACATATTTGGTGGAACACCTTTTAGGAAAAGCATTGAATCGCCTTCAGCATGGAAATCTCCTTGGCTCATTAACACTTTTTTGTCCAGCCCCAGGATTGATACTGAAATTACAATCGAGGATTTTGGGTATTTCATGAGCCCTTGTGACAGAAGCTATGATGCAATCGGGTTGATGAAACAGATCAGTGAACAAACTGCTGCTCAATATGCCAGTGCTCAAGAGATTCTAGGAAATGAGACTCCCAAGGCATTACCAAAAGAGGCGTCCAGAAATGACAGGGATGGAGACCAGGAAAATATCGATGCTCATGATCAGCATGGGAACCATTCTCAGTTGGCTTCAAGTGCTTTGGTGGAGCGACGTGTACTTGACTTCAGCGAATGTGGAACTCCGGTCAGAGGTGATAGCAGCAGCAAATCCTCAGCTATGAGCTTCTCAAGCCCTTCTTCGTATTTGTTGAAGGGCTGTAGATAG 2997 0.4188 MEGDQTILAASEGVIEGVQKIRSLNGRTTGPTRRSTKGQWTPEEDEILRKAVQRFKGKNWKKIAECFKDRTDVQCLHRWQKVLNPELVKGPWSKEEDEIIIDLVNRYGPKKWSTIAQHLPGRIGKQCRERWHNHLNPTINKEAWTQEEELALIRAHQIYGNRWAELAKLLPGRTDNSIKNHWNSSVKKKLDSYLASGLLTQLQNVPLVGNPNQPIASISSRLQQSGDDNGPRGAEGEEVSQSSQESAKAGHFSSAREMRSVVLQTGEEYKPNEKPSQASCSEPYYVSLDEVTASLQDMAGQGICTSQFIEQKYSHKPRNSTNGDCQLDLLDLTHISSMDFGPESSQLQNDRVAPSESPDMVNIPFQTSMGLGVATTMGSISVKLEHILMSDDECCRILISEAIGDECFSSGDYNKGVNMVNLSGCTSFLCQSLPSVQSVVSSTGDRLTYTVEPNQLVGSEDQQFVSRTQDNIIYANDLSSSPCIHRIDSTEMQEPSDVVKDDSKLVPVNSFGCGSDAKQTSYPTDEKPNVPTEQEDTGALCYEPPRFPSLDIPFLSCDLIQSGGDMQQEFSPLGIRQFMMSSMNMNLTPFRLWDSPSRDDSPDALLKSAAKTFTGTPSILKKRNRDLLSPLSDKRIDKRLEIEMTSTLIKNFSRLDVMFDDNETPVADLLPASSMQKRDSGTSVEGDKGSCRQDLVKVERAEDKKKSVILDDKKSEDDSGGNNSQDKVKQQPLDVDSEIKNDASAAAEIVQQPSEILVEHDMNDLLLYSPDQVNLKSEKVLSLSARTKKNPCSRINSPSVWVKEHERLSVAVTCVQSISSSGSGENSGDHTGNDGGLETCNIFGGTPFRKSIESPSAWKSPWLINTFLSSPRIDTEITIEDFGYFMSPCDRSYDAIGLMKQISEQTAAQYASAQEILGNETPKALPKEASRNDRDGDQENIDAHDQHGNHSQLASSALVERRVLDFSECGTPVRGDSSSKSSAMSFSSPSSYLLKGCR* 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0689 998 Gene3D - 36 88 - -
Gso4g0689 998 MobiDBLite consensus disorder prediction 707 723 - -
Gso4g0689 998 SMART sant 36 85 IPR001005 -
Gso4g0689 998 SMART sant 140 188 IPR001005 -
Gso4g0689 998 SMART sant 88 137 IPR001005 -
Gso4g0689 998 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 140 190 IPR017930 -
Gso4g0689 998 MobiDBLite consensus disorder prediction 512 535 - -
Gso4g0689 998 MobiDBLite consensus disorder prediction 917 954 - -
Gso4g0689 998 CDD SANT 143 183 IPR001005 -
Gso4g0689 998 MobiDBLite consensus disorder prediction 926 946 - -
Gso4g0689 998 ProSiteProfiles Myb-like domain profile. 136 186 IPR001005 -
Gso4g0689 998 Pfam Myb-like DNA-binding domain 37 83 IPR001005 -
Gso4g0689 998 Pfam Myb-like DNA-binding domain 141 183 IPR001005 -
Gso4g0689 998 Pfam Myb-like DNA-binding domain 89 135 IPR001005 -
Gso4g0689 998 MobiDBLite consensus disorder prediction 972 992 - -
Gso4g0689 998 ProSiteProfiles Myb-like domain profile. 84 135 IPR001005 -
Gso4g0689 998 PANTHER TRANSCRIPTION REPRESSOR MYB5 541 997 - -
Gso4g0689 998 PANTHER TRANSCRIPTION REPRESSOR MYB5 6 433 - -
Gso4g0689 998 SUPERFAMILY Homeodomain-like 33 89 IPR009057 -
Gso4g0689 998 CDD SANT 40 83 IPR001005 -
Gso4g0689 998 MobiDBLite consensus disorder prediction 668 694 - -
Gso4g0689 998 MobiDBLite consensus disorder prediction 221 256 - -
Gso4g0689 998 MobiDBLite consensus disorder prediction 970 998 - -
Gso4g0689 998 MobiDBLite consensus disorder prediction 707 734 - -
Gso4g0689 998 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 139 IPR017930 -
Gso4g0689 998 SUPERFAMILY Homeodomain-like 86 182 IPR009057 -
Gso4g0689 998 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 83 IPR017930 -
Gso4g0689 998 MobiDBLite consensus disorder prediction 236 250 - -
Gso4g0689 998 Gene3D - 89 140 - -
Gso4g0689 998 PANTHER MYB PROTEIN-RELATED 6 433 - -
Gso4g0689 998 PANTHER MYB PROTEIN-RELATED 541 997 - -
Gso4g0689 998 CDD SANT 91 135 IPR001005 -
Gso4g0689 998 Gene3D - 142 202 - -
Gso4g0689 998 ProSiteProfiles Myb-like domain profile. 32 83 IPR001005 -
Gso4g0689 998 MobiDBLite consensus disorder prediction 513 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0689 Gso-Chr4 6731564 6738292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0689 1 998 MYB Transcription Factor Family AT4G32730 43.421 0.0 730
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gso4g0689 Myb_DNA-binding 2.9e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0689 - K09420 gmx:100803634 1953.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0689 4 6731564 6738292 Gso6g0690 6 6378233 6384933 GST
Gso14g1131 14 24206486 24216051 Gso4g0689 4 6731564 6738292 PCT
Gso4g0689 4 6731564 6738292 Gso14g1131 14 24206486 24216051 PCT