Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0668 ATGGCGACGACGACCACGGAGTTCGATCTCGATTACGAGTTCCCCGATCTCGATTACGACCTTCGCTATCTCAGTCTCGCCGGAATCGATGCCCTCACCGCTTTCCAAAACCTATTACCGGATGCGGCGATGACTTCATTTTCAGCTTGTGGACTAATAGACCCTCATTGTTCTCAAAACCTCACTCCCATGCATTCCACCATCACTGCTACCATTGATTCTCAGTCAACGATTTGCGCCACCAGTAATGTTGGGAGCCCAATCTCGGCAAATAAACCAGAGGGCAGAGAGAATCGTACCAAAGGAGCCACGAGTGGTTCCTCTGAGCCGTCTGATGAGGATGATGAAGCAGGTGCTTGTGAACAGAGCACAAATCCAGCTGATATGAAGCGCCTTAGAAGGAAGGTTTCTAATCGCGACTCTGCTAGAAGGTCAAGAAGAAGAAAGCAAGCGCAATTGTCTGAGCTTGAGTTGCAGGTTGAAAAACTCAAAGTGGAAAATGCAACCCTATACAAGCAGTTCACGGATGCTAGTCAACATTTTCGTGAGGCTGATACGAATAACCGAGTGCTAAAATCAGATGTAGAAGCTTTGAGAGCCAAGGTGAAGTTAGCGGAGGATATGGTCACTAGGAGCTCTTTTACTACGTTAAACTATCAGCTTCTTCAGACACAACAACATCAAATGAGCACACCCCCGCAACTGAACACGACTAATCTTCGCCGCATGGCGCATGTTTCGCCAACCATCACCGTCCATGGTAATGATGCCTCATACAATGGTGTAACAGTTGGTGAACAGAATTCATCAGCACTTGGAAACTTGGATATGACTTTCAACAACATCAACAATGGAGTCATGAACAATGCTATGAGTTGTGGGACTATTTGGCCACTTGATTAG 903 0.4662 MATTTTEFDLDYEFPDLDYDLRYLSLAGIDALTAFQNLLPDAAMTSFSACGLIDPHCSQNLTPMHSTITATIDSQSTICATSNVGSPISANKPEGRENRTKGATSGSSEPSDEDDEAGACEQSTNPADMKRLRRKVSNRDSARRSRRRKQAQLSELELQVEKLKVENATLYKQFTDASQHFREADTNNRVLKSDVEALRAKVKLAEDMVTRSSFTTLNYQLLQTQQHQMSTPPQLNTTNLRRMAHVSPTITVHGNDASYNGVTVGEQNSSALGNLDMTFNNINNGVMNNAMSCGTIWPLD* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0668 300 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 133 148 IPR004827 GO:0003700|GO:0006355
Gso4g0668 300 PANTHER BASIC LEUCINE ZIPPER 63 1 299 - -
Gso4g0668 300 SUPERFAMILY Leucine zipper domain 130 179 IPR046347 GO:0003700|GO:0006355
Gso4g0668 300 Coils Coil 188 208 - -
Gso4g0668 300 Pfam bZIP transcription factor 129 174 IPR004827 GO:0003700|GO:0006355
Gso4g0668 300 MobiDBLite consensus disorder prediction 83 150 - -
Gso4g0668 300 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 128 191 IPR004827 GO:0003700|GO:0006355
Gso4g0668 300 Coils Coil 139 173 - -
Gso4g0668 300 PANTHER BZIP TRANSCRIPTION FACTOR 1 299 - -
Gso4g0668 300 SMART brlzneu 126 190 IPR004827 GO:0003700|GO:0006355
Gso4g0668 300 Gene3D - 129 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0668 Gso-Chr4 6514825 6520721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0668 73 298 bZIP Transcription Factor Family AT5G24800 48.918 4.80e-61 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso4g0668 bZIP_1 1.3e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0668 K25784 - gmx:780555 559.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0668 4 6514825 6520721 Gso6g0669 6 6175790 6180810 GST
Gso4g0668 4 6514825 6520721 Gso14g1099 14 21890124 21896915 PCT