Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0657 ATGCCACATAAAAGAGAATATTTCTGTCTTTTCATGCTCTTCACTTGTTTTTTGCCATCATTGGCCGACAATGCTCAAGTTCTGATGAACTTCAAAAGTAACTTGTCCAATGCTGATGCTTTAAAGAACTGGGGGGATCCATCGACTGGTCTGTGCAGCTGGACTGGTATATTATGCTTCGATCAAAAATTTCATGGCTTGAGATTAGAGAATATGGGACTAAGTGGCACTATTGACGTAGACACGCTGCTTGAGTTGTCCAATTTGAATAGTTTTAGTGTCATAAACAACAACTTTGAGGGTCCAATGCCTGCATTCAAGAAGCTTGTGAGTTTAAGGGCATTGTTTCTGTCCAATAACAAGTTCTCTGGTGAAATTCCGGATGATGCTTTTGAAGGCATGAAGCGTCTCAGGAAAGTATTTTTGGCTGAAAATGGGTTCACGGGTCATATTCCTGCATCCCTTGTTAAATTGCCTAAACTTTATGATGTGGACATACATGGAAATAGCTTTAATGGCAATATACCAGAATTTCAACAGAGGGATTTCAGAGTGTTTAATTTGTCTCACAACCACTTAGAGGGTCCAATACCAGAAAGCTTAAGCAACAGGGATCCAAGCTCATTTGCTGGCAATCAAGGTCTATGTGGGAAACCTCTAACCCCTTGCGTCGGAAGCCCTCCCTCACCTTCTGATCAAAACCCAATTTCAACTCTTTCACATCAAGAAAAAAAACAGAAAAAAAACCGCATCCTTTTAATCGTTATCGTAGTGGTGGCGGTGATTGTGTTGGCTTTAATACTAGCACTTGTGTTCATCCGTTACCGTCGAAAGAAAGCCGTGTTGGTCACGGATGCACAACCCCAGAACGTTATGAGTCCAGTTTCTAGTGAGTCCAAATCCATTGTAATGGCAGCCGAGTCCAAGAAAAGTGAAGATGGAAGTTTGAGCTTCGTGAGGAACGAAAGGGAGGAGTTTGACTTGCAAGACTTGCTTAGAGCCTCAGCTGAGGTTCTGGGGAGTGGCAGTTTTGGATCCACGTACAAGGCCATGCTTCTGAACGGACCAGCTGTGGTGGTGAAGAGATTCAAGCACATGAACAACGTTGGAAAGAAAGAGTTCTTTGAGCACATGAGAAGGCTTGGAAGGTTGTCACACCCCAACCTAGTTCCTCTTGTTGCATTTTACTATGGAAGAGAAGAGAAGCTTTTGGTTTATGACTTTGCTGAAAATGGCAGTTTGGCTAGTCATCTTCATGGCAGAGGTGGTTGTGTGTTGGACTGGGGAAGTCGTTTGAGGATCATAAAAGGAGTGGCAAGGGGATTAGGATACCTCTACAGAGAGTTCCCGGAGCAAGACTTAGCGCACGGTCATCTAAAATCGTCGAACGTAGTGTTGGACCATTCATTCGAGGCTCGTTTGGCGGAGTACGGGCTGGCGGCAGTGGTGGACAAGAGGCACGCGCAGCAGTTCATGGTGGCGTACAAGTCTCCGGAGGTGAGGCAGTTGGAGAGGCCCAGCGAGAAGAGTGATGTTTGGTGTTTGGGGATTCTGATATTGGAGCTTTTGACGGGGAAGTTTCCAGCTAATTATCTGAGGCACGGGAAGGGTGCGAGCGAGGATTTGGCGTCGTGGGTTGAGTCGATAGTGAGGGAAGGGTGGAGCGGGGAGGTGCTTGATAAGGAGATTCCTGGGAGAGGGAGTGGAGAGGGTGAGATGCTGAAGCTGTTGAGGATTGGGATGGGGTGCTGTGAATGGACTTTGGAGACTAGGTGGGATTGGAGGGAGGCTGTGGCCAAGATTGAGGACTTGAAGGAGACTGATAATGGAACTCAAGGGGATCATTCCTACTCATCGGATCACTTGTCTATCTCTCTCAATTAA 1884 0.4618 MPHKREYFCLFMLFTCFLPSLADNAQVLMNFKSNLSNADALKNWGDPSTGLCSWTGILCFDQKFHGLRLENMGLSGTIDVDTLLELSNLNSFSVINNNFEGPMPAFKKLVSLRALFLSNNKFSGEIPDDAFEGMKRLRKVFLAENGFTGHIPASLVKLPKLYDVDIHGNSFNGNIPEFQQRDFRVFNLSHNHLEGPIPESLSNRDPSSFAGNQGLCGKPLTPCVGSPPSPSDQNPISTLSHQEKKQKKNRILLIVIVVVAVIVLALILALVFIRYRRKKAVLVTDAQPQNVMSPVSSESKSIVMAAESKKSEDGSLSFVRNEREEFDLQDLLRASAEVLGSGSFGSTYKAMLLNGPAVVVKRFKHMNNVGKKEFFEHMRRLGRLSHPNLVPLVAFYYGREEKLLVYDFAENGSLASHLHGRGGCVLDWGSRLRIIKGVARGLGYLYREFPEQDLAHGHLKSSNVVLDHSFEARLAEYGLAAVVDKRHAQQFMVAYKSPEVRQLERPSEKSDVWCLGILILELLTGKFPANYLRHGKGASEDLASWVESIVREGWSGEVLDKEIPGRGSGEGEMLKLLRIGMGCCEWTLETRWDWREAVAKIEDLKETDNGTQGDHSYSSDHLSISLN* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0657 627 MobiDBLite consensus disorder prediction 611 627 - -
Gso4g0657 627 MobiDBLite consensus disorder prediction 605 627 - -
Gso4g0657 627 ProSitePatterns Protein kinases ATP-binding region signature. 339 361 IPR017441 GO:0005524
Gso4g0657 627 Gene3D Transferase(Phosphotransferase) domain 1 409 622 - -
Gso4g0657 627 Pfam Protein kinase domain 336 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g0657 627 SUPERFAMILY Protein kinase-like (PK-like) 337 602 IPR011009 -
Gso4g0657 627 SUPERFAMILY L domain-like 26 204 - -
Gso4g0657 627 Gene3D Ribonuclease Inhibitor 126 226 IPR032675 -
Gso4g0657 627 Gene3D Ribonuclease Inhibitor 18 125 IPR032675 -
Gso4g0657 627 MobiDBLite consensus disorder prediction 220 242 - -
Gso4g0657 627 ProSiteProfiles Protein kinase domain profile. 333 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g0657 627 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 7 613 - -
Gso4g0657 627 Pfam Leucine rich repeat N-terminal domain 23 59 IPR013210 -
Gso4g0657 627 PANTHER LRR RECEPTOR-LIKE KINASE 7 613 - -
Gso4g0657 627 Gene3D Phosphorylase Kinase; domain 1 298 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0657 Gso-Chr4 6439194 6442636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0657 7 625 Receptor kinase-like Gene Family AT4G31250 44.792 0.0 541
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso4g0657 Pkinase 5.9e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0657 - - gmx:100803999 1241.48