Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0654 ATGTGGCTGTCAAAGCATCACTCAGAGAAGAAGGATGGTGTGAATGGATTAGTAGCAGTGGCAATTGATAAAGAAAAAGGGGGCCAAAATGCACTAAAATGGGCAGTTGACAATCTCCTCACAAGAAGTTCAACTGTAATTCTCATCCATGTCAAGCTTCTCGCGCCAACTCTATCTCCGTCACCTTCTCTTTTCACCCCAAGGATAAGTGCTCTCCTTGGCGATGATACTTCACTGGTATCTAAAGAACCAGAAGGCAATAACAAAAACGTTTTCCTCCCATATCGTGTCTTCTGTACACGGAAAGATATACAATGCAAGGACGTTCTACTAGAAGATTCAGATATATCCAAAGCACTAATTGAATATGCTTCACAGGCGGGAATTGAGCATCTGGTTCTTGGCTCTTCAACAAAAACTAGCTTGCTCAAAAGATTCAAGGTATCAGATATTCCAGGAGCAGTTTCAAAAGGGGCACCAGATTTCTGTACAGTCTATGTTATTGCTAAAGGAAAGATTCAAACAGTGCGATCTGCTTCTCGACCTGCGCCGGCCATTGTCCCTAACCTGCTCAGTCAAGCAAGTGTCAGGACAGACCATTCAGACCCAAATGTGCCATTGACTCAAAGCATAAAAGAACAAGAAAGACATTCCTTTGATGCTGCAGCACCGCGTAGATCACTGGATGAATCAGAACCATTCAGGTCACCATTCACTTGGAAAGGTTACAATGGAAGACAATATGGGGACACTCCCAAGCCAGATAAGGACATATCCTTTGTAAGTACCGGAAGAAAAAGCATAGAAAACTTGTTCCCTTCGTTGAACTCAGATTCAGGATTTTCCAACCATCGACTATCATTGGGCTCAGACATAGATGGAAGCTTCAGCTTAGAGTCAATGCATGATGGAAGGAAGTCTACGGAAACTGGCACTCCTCCTGAATTCCCATCCCTCTCATTTGAGAGTGACCAGCATTCATCTTCTACATCACAAGCCGTGGATGACATGGAGGCTGAAATGAGGAGATTGAAGTTGGAACTGAAGCAAACCATGGAACTGTATAACACAGCCTGTAAAGAAGCAGTCACAGCACAACAGAAGGCAGTGGAACTTCAGAAGTGGAAACTAGAAGAAGAGAGGAGATTGGAAGAGGCAAGGCTTGCTGAGGAAACAGCATTGGCGATTGCCGAAAAGGAGAGAGCAAAGTCTAAAGCAGCCATTGAGGCTGCTGAAGCACAAAAGAGGATTGCAGAACTGGAAGCACAGAAGAGACTCAATGCAGAAATGAAAGCACTTAGAGAATCAGAAGAGAAAAAAAAATTGCTTGATGCTTTGGTAAATGTAGATGTGAGGTATAGAAGGTACACAATCGAGGAGATTGAAGCTGCAACAGATTTTTTTGCAGAATCCCTGAAAATTGGAGAAGGGGGATATGGTCCAGTTTTTAAGTGCCTTTTGGATCACACACCTGTTGCAGTCAAGGTTCTACGCCCTGATGCACAACAAGGAAGATCACAGTTTCAACGAGAGGTTGAGGTGTTGAGCTGCATACGGCATCCAAACATGGTTCTCCTCCTAGGTGCGTGTCCAGAATACGGGTGTCTAGTGTATGAGTACATGGCAAATGGAAGCTTGGATGATTGCCTCTTTCGAAAAGGCAGCACTCCCCCACTTCCTTGGCAGCTAAGGTTCAAAATAGCAGCTGAAATAGGCACAGGCTTGCTGTTCCTGCACCAGACAAAACCAGAACCTCTGGTGCACAGAGACTTGAAACCAGCCAACATCTTGCTAGACAGAAACTATGTGGCCAAAATCAGTGACGTAGGTTTGGCCAGGCTAGTTCCACCGTCTGTGGCGGACAGTGTCACGCAATATCACATGACATCCACAGCAGGAACCTTCTGCTACATAGATCCTGAGTATCAGCAGACAGGTATGTTAGGGGTGAAGTCAGACATATACTCCCTTGGGATCATTTTTTTGCAAATTTTGACAGCAAAATCACCAATGGGTTTGACCCATCATGTTGAAAGGGCCATAGAGAATGGAATTTTTACTGAGATGTTGGATCCATCAGTGCTTGATTGGCCAGTGGAGGATGCCTTGAAGCTTGCTAAGATGGGACTGCAGTGTGCCGAATTAAGGCGCAGAGACAGACCTGATCTTGGCAAGGTTATCCTACCAGAACTCAACAGGCTAAGAGACCTTGCTGAAGATAATAATCTAATTTCAGTTATGGGTAACTCTATGGATGCCCACCTTGAGAAACAACTTTCTGTGCATTTGGATGGAGGTGTCCATCATTTACTCGGTCGGGGGAAATTAGAGCAAACAATTCAGTCGGTTTTTTACTAG 2358 0.4457 MWLSKHHSEKKDGVNGLVAVAIDKEKGGQNALKWAVDNLLTRSSTVILIHVKLLAPTLSPSPSLFTPRISALLGDDTSLVSKEPEGNNKNVFLPYRVFCTRKDIQCKDVLLEDSDISKALIEYASQAGIEHLVLGSSTKTSLLKRFKVSDIPGAVSKGAPDFCTVYVIAKGKIQTVRSASRPAPAIVPNLLSQASVRTDHSDPNVPLTQSIKEQERHSFDAAAPRRSLDESEPFRSPFTWKGYNGRQYGDTPKPDKDISFVSTGRKSIENLFPSLNSDSGFSNHRLSLGSDIDGSFSLESMHDGRKSTETGTPPEFPSLSFESDQHSSSTSQAVDDMEAEMRRLKLELKQTMELYNTACKEAVTAQQKAVELQKWKLEEERRLEEARLAEETALAIAEKERAKSKAAIEAAEAQKRIAELEAQKRLNAEMKALRESEEKKKLLDALVNVDVRYRRYTIEEIEAATDFFAESLKIGEGGYGPVFKCLLDHTPVAVKVLRPDAQQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLDDCLFRKGSTPPLPWQLRFKIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNYVAKISDVGLARLVPPSVADSVTQYHMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQILTAKSPMGLTHHVERAIENGIFTEMLDPSVLDWPVEDALKLAKMGLQCAELRRRDRPDLGKVILPELNRLRDLAEDNNLISVMGNSMDAHLEKQLSVHLDGGVHHLLGRGKLEQTIQSVFY* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0654 785 CDD STK_N 17 171 - -
Gso4g0654 785 PANTHER OS02G0152300 PROTEIN 5 780 - -
Gso4g0654 785 MobiDBLite consensus disorder prediction 297 332 - -
Gso4g0654 785 SUPERFAMILY Protein kinase-like (PK-like) 451 726 IPR011009 -
Gso4g0654 785 MobiDBLite consensus disorder prediction 197 212 - -
Gso4g0654 785 PANTHER UNIVERSAL STRESS FAMILY PROTEIN 5 780 - -
Gso4g0654 785 MobiDBLite consensus disorder prediction 311 332 - -
Gso4g0654 785 Pfam Protein kinase domain 471 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g0654 785 ProSitePatterns Serine/Threonine protein kinases active-site signature. 586 598 IPR008271 GO:0004672|GO:0006468
Gso4g0654 785 Coils Coil 327 354 - -
Gso4g0654 785 Gene3D Phosphorylase Kinase; domain 1 447 540 - -
Gso4g0654 785 SMART serkin_6 468 728 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g0654 785 MobiDBLite consensus disorder prediction 197 233 - -
Gso4g0654 785 Gene3D Transferase(Phosphotransferase) domain 1 541 751 - -
Gso4g0654 785 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 18 146 - -
Gso4g0654 785 Gene3D HUPs 17 168 IPR014729 -
Gso4g0654 785 MobiDBLite consensus disorder prediction 213 232 - -
Gso4g0654 785 Coils Coil 394 440 - -
Gso4g0654 785 Pfam Universal stress protein family 18 146 IPR006016 -
Gso4g0654 785 ProSiteProfiles Protein kinase domain profile. 468 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0654 Gso-Chr4 6414865 6420790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0654 1 761 Receptor kinase-like Gene Family AT1G78940 55.670 0.0 781
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Gso4g0654 Pkinase 1.2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0654 - - gmx:100803461 1487.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0654 4 6414865 6420790 Gso6g0656 6 6088775 6093820 GST