Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0649 ATGGCAGTGGAGCTGATGGGGTTCCCCCAAATGGGCGAACAGAAGGCAATTGAAGAAGCAGCCGCCGAAGGCCTCAAGGGCATGGAACACCTCCTCCGTCTCCTCTCCCATCAACCTTCCCACCTCCGCACTCACCACACCGACGCCACCGTTTCCAACTTCAAAAAACTCATCTCCCTTCTCAACCGCCGCACCGGCCATGCCCGTTTCCGCCGCGCACCCCTCCCTTCCACTTCCAACTCTCTCGCCCCATCCCCTCCACCGGCTAACCCGGTCACCTTCGCCCCTTCGCAGTCACAGAGTCTAACCCTCGATTTCTCAAAACCTAACATGTTCAACACCACCAACGCCAAATCCATGGACCTCGAGTTCTCTAAAGAAACCTTCAGCGTCTCCTCCAACTCCTCCTTCATGTCCTCCGCTATCACCGGCGACGGTAGCGTCTCCAATGGCAAACTAGGATCCTCCCTCTTCCTCACTCCTCCGCCAGTCTCCGCCGGAAAACCTCCTCTCTCGTTTGCTCCGATCAAGAAGAGGTGCCACGACCACCGCGAGCACTCCGACGACATCTCCGGGAAACTCTCCGGCTCCAGCAAGTGCCACTGCATCAAGAGAAGGAAGAATCGTGTGAAGAAAACGGTTAGAGTTCCGGCGATTAGTTCGAAGGTCGCCGATATTCCGCCGGATGAGTACTCGTGGAGGAAGTACGGACAGAAGCCGATCAAGGGATCACCGTACCCGAGGGGGTATTACAAGTGCAGTACCGTGAGAGGGTGCCCGGCGAGGAAACACGTGGAGCGTGCTTCGGACGATCCGACGATGTTGATTGTAACGTACGAGGGGGAGCACCGACACTCGATTCAGACCGCGATGCAGGAGAACATTTCCGGGGGAGTGGGTTTGGTATTCGAGTCAACGTGA 921 0.5711 MAVELMGFPQMGEQKAIEEAAAEGLKGMEHLLRLLSHQPSHLRTHHTDATVSNFKKLISLLNRRTGHARFRRAPLPSTSNSLAPSPPPANPVTFAPSQSQSLTLDFSKPNMFNTTNAKSMDLEFSKETFSVSSNSSFMSSAITGDGSVSNGKLGSSLFLTPPPVSAGKPPLSFAPIKKRCHDHREHSDDISGKLSGSSKCHCIKRRKNRVKKTVRVPAISSKVADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERASDDPTMLIVTYEGEHRHSIQTAMQENISGGVGLVFEST* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0649 306 MobiDBLite consensus disorder prediction 69 98 - -
Gso4g0649 306 Gene3D WRKY domain 212 287 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso4g0649 306 SMART WRKY_cls 227 287 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso4g0649 306 ProSiteProfiles WRKY domain profile. 222 288 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso4g0649 306 Pfam Plant zinc cluster domain 177 225 IPR018872 -
Gso4g0649 306 Pfam WRKY DNA -binding domain 229 285 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso4g0649 306 PANTHER WRKY PROTEIN 10 305 - -
Gso4g0649 306 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 10 305 IPR044810 GO:0003700
Gso4g0649 306 SUPERFAMILY WRKY DNA-binding domain 225 287 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0649 Gso-Chr4 6340047 6342097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0649 1 305 WRKY Transcription Factor Family AT2G24570 61.043 1.31e-116 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso4g0649 WRKY 5.1e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0649 - - gmx:100127394 569.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0649 4 6340047 6342097 Gso6g0651 6 6032375 6034240 GST