Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0637 ATGGGCTTCTCCATCCACATCCGCCACTACTTCGGCTCCCCCTCCGCCAGCATCCACAACCTCCCTGACACCTTTGGTAGGTCGCGACGCAGCTCACGCGAGTTTCGACCAGGCGGTGATCGACACGTTCCTGACGCTGGAGTACTCGATGGCGATGAATGTGAAAAGCTAGGAAAGGGGACGCTGGAGTGTGCGGTGTGCTTGAACGAGTTCGAGGACACCGAAACGCTGCGTTTAATCCCCAAGTGCGACCTCGTGTTCCACCCCGAGTGCATAGACGAGTGGCTACCTTCCCACACCACTTGCCCCGTGTGTCGCGCCAAACCCATCCTTGTTTTGGCCAACATCAATGGCGAAATGCCATGTTGA 369 0.5745 MGFSIHIRHYFGSPSASIHNLPDTFGRSRRSSREFRPGGDRHVPDAGVLDGDECEKLGKGTLECAVCLNEFEDTETLRLIPKCDLVFHPECIDEWLPSHTTCPVCRAKPILVLANINGEMPC* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0637 122 PANTHER RING FINGER DOMAIN-CONTAINING 3 110 - -
Gso4g0637 122 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 28 110 IPR013083 -
Gso4g0637 122 ProSiteProfiles Zinc finger RING-type profile. 64 106 IPR001841 -
Gso4g0637 122 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 3 110 - -
Gso4g0637 122 Pfam Ring finger domain 63 106 IPR001841 -
Gso4g0637 122 SUPERFAMILY RING/U-box 63 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0637 Gso-Chr4 6203264 6203632 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0637 3 108 Rapid Response to Elicitors AT3G05200 54.128 4.43e-29 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0637 K10664 - gsj:114408332 254.988