Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0598 ATGGGAGCACCATTTAAGGGAATAATTCAAGATTTCAAGGGAAGAGCTCAATGCTATAAACAAGATTGGATTTGTGCACTCTGTTCTGGCGTTAGCATATTGGCTCCAACTTTCTACATATTCTTTGCTTCTGCTCTTCCTGTCATTGCTTTTGGAGAACAGCTTAATAGGGATACAGATGGAACCTTGAGCACAGTGGAAACATTGGCATCTACTGCTATTTGTGGAGTTATTCACTCAATATTAGGTGGCCAACCTTTGTTGATTTTAGGAGTTGCTGAACCAACTGTCATAATGTACACTTACCTCTACAGTTTTTGCCAAAAAACACCTGAACTGGGTGGCAAGCTCTTTCTGCCTTGGGCTGGTTGGGTTTGTGTTTGGACGGGAGTCTTTTTGATTCTGCTTGCAATTTTCAATGCTTGCACAATTATCACAAGGTTTACAAGAATTGCAGGGGAGTTGTTTGGCATGCTCATAACTGTTCTTTTCTTTCAAGAGGCTATAAAGGGATTGATAGGCGAGTTCAACATGCCAAAGAATGAAAATCCTTCCTCAGTGGAATTTCAATTCCAGTGGCTGTATACAAATGGATTACTCGCAATCATTTTCTGTTTTGGACTACTCGTCACTGCCCTTAAAAGCAGAAGAGCTAGAACGTGGCGATATGGAACAGGGTGGCTACGAGGATTTATAGCAGATTATGGGGTTCCAATGATGGTAGTGTTATGGACTGCACTGTCTTATACTGTACCAGGCAAAGTTCCAGATGGTGTTCCTAGAAGGCTCATTTCTCCCCTTCCCTGGGATGCTGCATCTCTCTATCACTGGACAGTAGTGAAGGACATGGGGAAGGTACCAGTGGTTTATATATTTGGGGCAATTATTCCAGCTCTGATGATAGCAGGCTTATACTTTTTCGATCACAGCGTAGCTTCGCAGATGGCGCAACAGAAAGAATTTAACCTTCAAAAGCCATCTGCCTACCACTATGATGTTTTGCTGCTTGGAATAATGACTTTGATTTGCGGGATCCTTGGCCTTCCTCCTTCAAATGGAGTCCTTCCACAGTCCCCCATGCATACAAAGAGTTTAGCAGTTCTTAGGAGGCGGATGATCCGAAAGAAGGTGGTGAAGAGCGCCAAGGAATGTATTAAGCAACGAAGGACCAACTCTGAATTATATGGAAAGATGCAAGAGGTGATTGTAGAAATGGATACAGACCCTACGGTTAAAGAATTGGAGAATTTGAAGGAGGCTGTAATGCAATCTGATAGCAAGGATGGAGCAAAGGAAAAATTTGATCCTGAGAAACACATAGATGAATATCTACCAGTGCGGGTTAATGAGCAAAGAATGACCAACTTATTGCAGTCTCTCCTGGTTGCTGTATCAATCTTAGCCATGTCAGTTATCAAAAGGATACCAACCTCAGTTCTATGGGGATATTTTGCTTACATGGCAATTGATAGTCTCCCAGGGAATCAGTTCTGGGAAAGGATATTGCTTCTCTTCGTCACCTCAAGCCGGCGTTACAAAATTTTGGAAGGTTCTCATGCCTCTTTTGTGGAGACAGTACCATTCAAGACCATAGCTGCATTTACAGCCTTACAGTTAGTATATTTTGCGTTATGTTTCGGGGTGACTTGGATACCTATAGGTGGAATATTGTTCCCCGTACCATTCTTCCTTCTCATAATTATAAGAGAACACTTGCTTCCAAAGATGTTCAAGCCTAACCATCTTCAAGAACTAGATGCTTCTGGTTATGAGGAAATTATTGGTGCTCCACATGGTTCACTGAGGGATAAGGAGCCAGATACTGATACTGATGGAAGCTCGGAAGACTTTTACGATGCAGAGATATTGGATGAGATGACAACCAACAGGGGAGAGTTGAAACTTAGAACTGTAAGCAGCTTCAATGATAGAAACCACAGCTTCAGTGAAGACAGACACACTCAGGTTTATCCTGGAAATGCTGTCTGA 1989 0.4238 MGAPFKGIIQDFKGRAQCYKQDWICALCSGVSILAPTFYIFFASALPVIAFGEQLNRDTDGTLSTVETLASTAICGVIHSILGGQPLLILGVAEPTVIMYTYLYSFCQKTPELGGKLFLPWAGWVCVWTGVFLILLAIFNACTIITRFTRIAGELFGMLITVLFFQEAIKGLIGEFNMPKNENPSSVEFQFQWLYTNGLLAIIFCFGLLVTALKSRRARTWRYGTGWLRGFIADYGVPMMVVLWTALSYTVPGKVPDGVPRRLISPLPWDAASLYHWTVVKDMGKVPVVYIFGAIIPALMIAGLYFFDHSVASQMAQQKEFNLQKPSAYHYDVLLLGIMTLICGILGLPPSNGVLPQSPMHTKSLAVLRRRMIRKKVVKSAKECIKQRRTNSELYGKMQEVIVEMDTDPTVKELENLKEAVMQSDSKDGAKEKFDPEKHIDEYLPVRVNEQRMTNLLQSLLVAVSILAMSVIKRIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVTSSRRYKILEGSHASFVETVPFKTIAAFTALQLVYFALCFGVTWIPIGGILFPVPFFLLIIIREHLLPKMFKPNHLQELDASGYEEIIGAPHGSLRDKEPDTDTDGSSEDFYDAEILDEMTTNRGELKLRTVSSFNDRNHSFSEDRHTQVYPGNAV* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0598 662 Pfam HCO3- transporter family 446 536 IPR011531 GO:0006820|GO:0016021
Gso4g0598 662 Pfam HCO3- transporter family 4 178 IPR011531 GO:0006820|GO:0016021
Gso4g0598 662 Pfam HCO3- transporter family 196 374 IPR011531 GO:0006820|GO:0016021
Gso4g0598 662 PANTHER BORON TRANSPORTER-LIKE PROTEIN 1 657 - -
Gso4g0598 662 Gene3D Helical hairpin bin 15 57 - -
Gso4g0598 662 PANTHER ANION EXCHANGE PROTEIN 1 657 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0598 Gso-Chr4 5762237 5767238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0598 4 661 Antiporters AT4G32510 66.172 0.0 935
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0598 K24194 - gmx:100787412 1337.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0598 4 5762237 5767238 Gso6g0596 6 5501130 5506502 GST
Gso17g1762 17 34285380 34303043 Gso4g0598 4 5762237 5767238 PCT
Gso4g0598 4 5762237 5767238 Gso17g1762 17 34285380 34303043 PCT