Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0591 ATGACCAAGAAGAAGAATCCCCTGGTGTTTATGGATGTGTCCATCGATGGGGATCCTGTTGAAAGGATGGTTTTTGAGCTTTTCTATGATGTTGCTCCCAAGACTGCAGAAAACTTTCGTGCATTATGTACAGGAGAAAAAGGTATCAGTCCAAATACTGGAAAATCACTGCACTACAAGGGTTCTTTCTTCCATCAGATCATAAAAGGTTCCATTGTGCAGGGTGGAGATTTTGTCAATCGAAATGGAACTGCTGGAGAAAGCATATATGGTTCGAAGTTCCCAGATGAGTCACCTAAGCTAAAGCATGATGCTACCGGACTTTTATCAATGGCAATTGCAGACCGTGACACACTTGGTTCTCATTTTATTATCACTTTGAAAGCTGATCATCATCTTGATAGGAAGCATGTAGTCTTTGGGAAGCTTGTCCAAGGGCCTAACGTATTGAAGAAAATTGAAGAAGTGGGTGATGAAGAAGGGCATCCAACTGTAACAGTTAAAATCATTAATTGTGGTGAATATAGCGAGGATGGAAAGAAGGTAAATAAATCAAAAATGGGAAAGAATAAAAAATCTTCAAAAGACAGAAGGAAAAGGAGAAAATACTACTCATCCAAATCAGGAAGCTCTTCAGATTCTGATACAGAATCTTCGGAAACTGATAGTGATTCTGAGTCAGATATGTCCTCATCGTCTTACATAAGTTCTTCCAGTGATGACAGGCGAAGGAAGAGAAAGAGATCTAAGAAAGATAAATATAGACGGGAAAAAAGAAGAGATAAACGTCGTGACAAGAAGCGAAGGAAAAAGGACAAGAGATCAAAGCGTAAATCAAAAAGGGAATCCGGTAGTGACTCAGATAGTGAGAGTAACAGTGACAGTAGCTCTGAAGGTGAAGGTATTGGTGCTCAACATAAAGGGCTGAAGCTTAAAGATCATTCTCAGAAAAATGCTGAAACAAGGTCTGCCTTGGTTGCTGAGAAAGATTTGCCTCCTGCGCATCATGAAAAGGAGGAAGTGGGTATGCTAGAAAATGAGGAAAAATTCTCAAAGGAAAACGGAGAGCAACGCAGCAATGGCATTGGAGGAGCTGACTATGGATCTGACAGAAGTGAAGAGAGGCAGCCTGACGTTATGGATGATCATTCAGGCAAAACTAGGAGTCGAAGTGTGAGTCCTAAGCGACCCATCAGTAAGAGTATGAGTATTAGTCCCAGGAGGAGTGCGAGATTGAGCAAGAGCCCAAGTGTTACTCCAAAAAGGAGATTGAGCAAGAGCCCAAGTGTTACTCCAAAAAGGAGATTGAGCAAAAGTCCAAGTGTTAGAAGCCCTCCTCCATCACAGAGGAGTTTGAGCAGAAGTCCCGCCAGAAGCATCAGCAGGAGTCCAAGCAGAAGCATCAGTAGAAGCCCAGTGAGAGGCAGGAATGGGAGAAGTGTCAGTAGAAGCCCTGTGAGAGGCAGGAATGGGAGAAGTGTCAGTAGAAGCCCTGTGAGAGTCAGGAATGGGAGAAGTGTCAGTAGAAGCTCAGTAAGAGTCAGGAATGGGAGAAGTGTCAGTAGAAGCCCAGTAAGAGTCAGGAATGGGAGAAGTGTCAGTAGAAGCCCAGTGAGAGGCAGGAATTGGAGAAGTGTCAGTAGAAGCCCAGTGAGAGGCAGGAATGGTAGAAGTGTCAGTAGAAGCCCTGCGAGAACTCGTTCTCTTAGAAGTGTCAGCAAGAGCCCTGTAAGATCCCATTCTCGAAGTCACCGGAGCAGGAGTTCTCCTAGAGCACCATCAGGAAAAATTATCAGCAAAAGCCCTGTAAGAGTATTGAGAAAGAGTTTAAGCCGCAGTCCAGTTAGATCACCTGCAAGAAGTTTAAGCCGAAGCTCTGGCAGGGTTCCTTCAAAGAAAAGCATCAGCCGAAGCCCGGTCAGAGCACCTAGTAGAAGCAATCGCCGCAGTTATTCTAGGAGTCCTAGCCCTGTTCATAGGACAAGGACTCCTCGTGGGAGGAGTGTGTCAAGGAGTGTATCACCTGATGCTTCACCAAAGCGTATCAGAAGGGGAAGAGGTTTCAGTGAAAGATACTCTTATGCAAGAAGGTATAGAACCCCCTCTCGGTCTCCTGTGAGGTCATACCGCTACAATGGAAGAAATGACCGGGACAGATATTCTACTTACAGAAGGTTTTCCCCTAGGCGTTTCAGGAGCCCACCACCACGTGGAAGAACTCCCCCAAGGTATCGAAGCAGGAGGAGCAGGACGCCATCTGTTTCACGCAGTCCACGATATCGAGCCCGACGATATAGCCGAAGTAGGAGCCCGGTTCGCAGTCGTTCCCTAGTTGATAGATCCCGCCCCTCTCGTGTGGAGAGGCATGCATCTTCTTCTCGGAGCAGGAGTCCATCAAAATCCCGGTCTAGGTCCAGGTCATCCGTGGAGTCTCCGCCAAGAGCAAGTAGAGACAGCAGGTCCAGGTCATCGTCCAGAAGCCCTGATGGAAAGCAAGGCTTGGTCTCATATGGCGATGGTTCTCCATACTAA 2532 0.4617 MTKKKNPLVFMDVSIDGDPVERMVFELFYDVAPKTAENFRALCTGEKGISPNTGKSLHYKGSFFHQIIKGSIVQGGDFVNRNGTAGESIYGSKFPDESPKLKHDATGLLSMAIADRDTLGSHFIITLKADHHLDRKHVVFGKLVQGPNVLKKIEEVGDEEGHPTVTVKIINCGEYSEDGKKVNKSKMGKNKKSSKDRRKRRKYYSSKSGSSSDSDTESSETDSDSESDMSSSSYISSSSDDRRRKRKRSKKDKYRREKRRDKRRDKKRRKKDKRSKRKSKRESGSDSDSESNSDSSSEGEGIGAQHKGLKLKDHSQKNAETRSALVAEKDLPPAHHEKEEVGMLENEEKFSKENGEQRSNGIGGADYGSDRSEERQPDVMDDHSGKTRSRSVSPKRPISKSMSISPRRSARLSKSPSVTPKRRLSKSPSVTPKRRLSKSPSVRSPPPSQRSLSRSPARSISRSPSRSISRSPVRGRNGRSVSRSPVRGRNGRSVSRSPVRVRNGRSVSRSSVRVRNGRSVSRSPVRVRNGRSVSRSPVRGRNWRSVSRSPVRGRNGRSVSRSPARTRSLRSVSKSPVRSHSRSHRSRSSPRAPSGKIISKSPVRVLRKSLSRSPVRSPARSLSRSSGRVPSKKSISRSPVRAPSRSNRRSYSRSPSPVHRTRTPRGRSVSRSVSPDASPKRIRRGRGFSERYSYARRYRTPSRSPVRSYRYNGRNDRDRYSTYRRFSPRRFRSPPPRGRTPPRYRSRRSRTPSVSRSPRYRARRYSRSRSPVRSRSLVDRSRPSRVERHASSSRSRSPSKSRSRSRSSVESPPRASRDSRSRSSSRSPDGKQGLVSYGDGSPY* 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0591 843 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP63 1 360 - -
Gso4g0591 843 MobiDBLite consensus disorder prediction 329 355 - -
Gso4g0591 843 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Gso4g0591 843 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Gso4g0591 843 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Gso4g0591 843 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Gso4g0591 843 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Gso4g0591 843 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 360 - -
Gso4g0591 843 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Gso4g0591 843 MobiDBLite consensus disorder prediction 185 205 - -
Gso4g0591 843 MobiDBLite consensus disorder prediction 796 810 - -
Gso4g0591 843 MobiDBLite consensus disorder prediction 710 725 - -
Gso4g0591 843 MobiDBLite consensus disorder prediction 614 675 - -
Gso4g0591 843 MobiDBLite consensus disorder prediction 368 389 - -
Gso4g0591 843 MobiDBLite consensus disorder prediction 178 843 - -
Gso4g0591 843 MobiDBLite consensus disorder prediction 811 825 - -
Gso4g0591 843 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 11 173 IPR002130 GO:0000413|GO:0003755
Gso4g0591 843 MobiDBLite consensus disorder prediction 391 576 - -
Gso4g0591 843 MobiDBLite consensus disorder prediction 305 319 - -
Gso4g0591 843 MobiDBLite consensus disorder prediction 677 697 - -
Gso4g0591 843 SUPERFAMILY Cyclophilin-like 4 176 IPR029000 -
Gso4g0591 843 MobiDBLite consensus disorder prediction 773 794 - -
Gso4g0591 843 Gene3D - 1 175 IPR029000 -
Gso4g0591 843 MobiDBLite consensus disorder prediction 243 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0591 Gso-Chr4 5703597 5710115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0591 26 170 U-box Gene Family AT5G67530 40.816 2.31e-20 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0591 K09566 - gmx:100785820 374.015