LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso4g0572	ATGAATATTGCTGTGGCTGGAGCTGAAGCAGTTGAAGTATGTGGAGGTCCACCTATCCAAGTTTCACCGGGTAGATTAGATACATTAACACAAGAACTTGTGGCTTTGTCTGGAGCCCACACTATTGGAAGTAAAGGTTTTGGAAGCTCAATTTCTTTTGAAAATTCATATTATAAGGTTCTTTTGGAGAAGCCCTGGACGTCTTCAGGTGGTATGTCGAGTATGATTGGCCTTCCTTCAGATCACGCTCTTGTTGAGGATGATGAATGCTTAAGATGGATTAAAAAATACGCAGACAGTGAGAATCTGTTCTTTGAAGATTTCAAAAATGCGTATGTCAAGCTGGTGAATTCTGGTGTGGGTGGAATAGCTTATAAATTCAGGAGTTGA	390	0.4051	MNIAVAGAEAVEVCGGPPIQVSPGRLDTLTQELVALSGAHTIGSKGFGSSISFENSYYKVLLEKPWTSSGGMSSMIGLPSDHALVEDDECLRWIKKYADSENLFFEDFKNAYVKLVNSGVGGIAYKFRS*	130

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso4g0572	129	PANTHER	THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED	30	119	IPR044831	GO:0004601\|GO:0034599
	Gso4g0572	129	PANTHER	THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED	3	29	IPR044831	GO:0004601\|GO:0034599
	Gso4g0572	129	Gene3D	-	2	47	-	-
	Gso4g0572	129	Gene3D	Peroxidase, domain 2	48	115	-	-
	Gso4g0572	129	PANTHER	L-ASCORBATE PEROXIDASE 6-RELATED	30	119	-	-
	Gso4g0572	129	PANTHER	L-ASCORBATE PEROXIDASE 6-RELATED	3	29	-	-
	Gso4g0572	129	Pfam	Peroxidase	30	100	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Gso4g0572	129	ProSitePatterns	Peroxidases proximal heme-ligand signature.	32	42	IPR019793	-
	Gso4g0572	129	SUPERFAMILY	Heme-dependent peroxidases	3	119	IPR010255	GO:0004601\|GO:0006979\|GO:0020037

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso4g0572	Gso-Chr4	5540534	5543739	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso4g0572	3	120	Peroxidase	AT4G31760	28.342	1.33e-08	50.1

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso4g0572	K00434		-	gmx:100782791	250.751

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso4g0572	4	5540534	5543739	Gso6g0569	6	5275071	5280578	GST