Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0563 ATGTTCGCCGAAGAGAATGGCCTCAAGGGAGACCCCAGACTCCAAGCCATTTCCCAAGCCATCAGAGTCGTCCCTCACTTCCCCAAACATGGAATAATGTTCCAAGACATAACGACATTGCTGTTGGATCACAAGGCGTTTAAAGACACCGTCGACATTTTTGTCGATCGTTACAGAGACATGCACATTTCCGTAGTTGCTGGAATTGAGGCAAGGGGGTTCATGTTTGGTCCCTCAATTGCGTTGGGCATTGGTGCAAAGTTTGTTCCTTTACGCAAACCACGGAAGCTGCCAGGTGAAGTAATTTCAGAAAAATATGCTCTAGAATATGGAACTGATTGCTTGGAGTTGCATGTTGGTGCTGCCCAGCCCGGTGAACGGGCCATAATAATTGATGACTTGGTGGCCACAGGTGGAACTCTGTCAGCAGGAGTAAAACTTCTAGAACGTGTTGGGGCTGAAGTGGTGGAATGTGCTTGTGTCATTGGTGTGCCTGATGTCAAGGGGCAGTGCAGGAGTATTGGAAAGCCACTTTATGTTCTTGTTGAGCCACGTAAAGCAGATAAATGTCAAGCTCAAGCAGATAAATGTTACTGA 597 0.4707 MFAEENGLKGDPRLQAISQAIRVVPHFPKHGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMHISVVAGIEARGFMFGPSIALGIGAKFVPLRKPRKLPGEVISEKYALEYGTDCLELHVGAAQPGERAIIIDDLVATGGTLSAGVKLLERVGAEVVECACVIGVPDVKGQCRSIGKPLYVLVEPRKADKCQAQADKCY* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0563 198 Pfam Phosphoribosyl transferase domain 43 166 IPR000836 -
Gso4g0563 198 Gene3D - 6 184 IPR029057 -
Gso4g0563 198 CDD PRTases_typeI 51 183 IPR000836 -
Gso4g0563 198 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 5-LIKE ISOFORM X1 1 191 - -
Gso4g0563 198 Hamap Adenine phosphoribosyltransferase [apt]. 17 184 IPR005764 GO:0003999|GO:0005737|GO:0006168
Gso4g0563 198 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 1 191 - -
Gso4g0563 198 SUPERFAMILY PRTase-like 20 176 IPR029057 -
Gso4g0563 198 TIGRFAM apt: adenine phosphoribosyltransferase 18 175 IPR005764 GO:0003999|GO:0005737|GO:0006168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0563 Gso-Chr4 5446965 5452073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0563 11 183 PRT Gene Family AT1G27450 69.364 1.71e-88 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0563 K00759 - gmx:100499904 399.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0563 4 5446965 5452073 Gso6g0559 6 5180805 5185686 GST
Gso14g0996 14 14179120 14183156 Gso4g0563 4 5446965 5452073 PCT
Gso17g1800 17 35271943 35275327 Gso4g0563 4 5446965 5452073 PCT
Gso4g0563 4 5446965 5452073 Gso14g0996 14 14179120 14183156 PCT
Gso4g0563 4 5446965 5452073 Gso17g1800 17 35271943 35275327 PCT