Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0524 ATGGAAGAGTGTCACACGGTGTTCGGAAAGTACGAGATGGGGAGGCTTCTGGGGAAGGGCACGTTTGCCAAAGTGTATTACGGGAAGCAAATAAGCACGGGCGAGAGCGTGGCAATCAAAGTAATCAACAAAGAGCAAGTGAGAAAAGAAGGAATGATGGAACAAATCAAACGCGAAATTTCCGTGATGCGTTTGGTGCGACACCCAAACGTGGTGGAAATCAAGGAAGTGATGGCCACAAAGACAAAAATCTTCTTCGTGATGGAATACGTGCGTGGCGGGGAACTCTTCGCCAAAATCTCCAAAGGCAAACTCAAAGAAGATCTCGCCCGCAAGTATTTTCAGCAGTTAATCAGCGCCGTTGATTACTGCCACAGCAGAGGTGTATCCCACCGTGATCTCAAACCAGAGAATCTACTCCTCGACGAAGACGAAAACCTTAAAATCTCCGATTTCGGTCTCTCCGCGCTGCCGGAGCAGCTTCGTTACGATGGACTCCTCCACACCCAGTGCGGCACCCCTGCCTACGTGGCACCAGAAGTGTTAAGAAAAAAAGGCTACGACGGGTCAAAAGCAGATATCTGGTCATGCGGCGTCGTTTTGTACGTTCTTCTCGCTGGATTTCTTCCTTTCCAACACGAGAATCTCATGACAATGTATTACAAAGTTCTCAGAGCCGAGTTTGAGTTTCCACCGTGGTTTTCGCCTGAGTCAAAGAGGCTAATCTCCAAGATTCTAGTGGCGGATCCCGCGAAGAGAACCACCATTTCCGCCATAACTCGCGTGCCGTGGTTCCGGAAGGGCTTTTCTTCGTTTTCCGCGCCGGACTTGTGCCAGTTGGAGAAACAAGAGGCCGTTACGGAGGAAGAAAACAATTCCAAGGTGCCCAAGTTCTTCAACGCGTTTGAGTTTATTTCGTCGATGTCTTCCGGGTTCGACCTCTCGGGGCTGTTCGAGACCAAGAGGAAGACAGCGGCGGTGTTCACGTCGAAGTGCTCCGCGGCGGCGATTGTGGCGAAGATTGCGGCGGCGGCGCGGGGGCTGAGGTTCCGCGTGGCGGAGGTCAAGGACTTCAAGATCCGGCTGCAGGGTGCGGCGGAGGGGAGGAAGGGGAGGCTGGCGGTCACGGCGGAGGTGTTCGAGGTGGCGCCGGAGGTCGCCGTCGTGGAGTTTTCGAAGTCCGCCGGCGACACGTTGGAATACGCCAAGTTCTGTGAGGAGGACCTGAGGCCCGCGCTGAAGGACATTGTTTGGACGTGGCAAGGGGATGCCACGTGTGCTGCTAACTTCCCCGCCTGTCACGGTGAGGAGTGTCAAAAGCAGGTTGTTGTTAGTACTATATAA 1344 0.5365 MEECHTVFGKYEMGRLLGKGTFAKVYYGKQISTGESVAIKVINKEQVRKEGMMEQIKREISVMRLVRHPNVVEIKEVMATKTKIFFVMEYVRGGELFAKISKGKLKEDLARKYFQQLISAVDYCHSRGVSHRDLKPENLLLDEDENLKISDFGLSALPEQLRYDGLLHTQCGTPAYVAPEVLRKKGYDGSKADIWSCGVVLYVLLAGFLPFQHENLMTMYYKVLRAEFEFPPWFSPESKRLISKILVADPAKRTTISAITRVPWFRKGFSSFSAPDLCQLEKQEAVTEEENNSKVPKFFNAFEFISSMSSGFDLSGLFETKRKTAAVFTSKCSAAAIVAKIAAAARGLRFRVAEVKDFKIRLQGAAEGRKGRLAVTAEVFEVAPEVAVVEFSKSAGDTLEYAKFCEEDLRPALKDIVWTWQGDATCAANFPACHGEECQKQVVVSTI* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0524 447 SMART serkin_6 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g0524 447 CDD CIPK_C 300 414 - -
Gso4g0524 447 Gene3D Phosphorylase Kinase; domain 1 1 90 - -
Gso4g0524 447 ProSiteProfiles NAF domain profile. 294 319 IPR018451 GO:0007165
Gso4g0524 447 Pfam NAF domain 296 353 IPR004041 GO:0007165
Gso4g0524 447 ProSitePatterns Protein kinases ATP-binding region signature. 17 40 IPR017441 GO:0005524
Gso4g0524 447 ProSiteProfiles Protein kinase domain profile. 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g0524 447 CDD STKc_SnRK3 10 264 - -
Gso4g0524 447 PANTHER - 1 431 - -
Gso4g0524 447 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Gso4g0524 447 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 25-RELATED 1 431 - -
Gso4g0524 447 Pfam Protein kinase domain 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g0524 447 Gene3D Transferase(Phosphotransferase) domain 1 91 271 - -
Gso4g0524 447 Gene3D Kinase associated domain 1, KA1 294 419 - -
Gso4g0524 447 SUPERFAMILY Protein kinase-like (PK-like) 7 284 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0524 Gso-Chr4 4992865 4994802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0524 2 423 CBL-interacting serine-threonine protein kinases AT5G25110 70.139 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gso4g0524 Pkinase 1.1e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0524 - - gmx:100817520 847.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0524 4 4992865 4994802 Gso6g0519 6 4737527 4739465 GST