Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0522 ATGGATCAAGAGGTAGAAACGCTTGAAGCGAAGCTGCAACGTGTGAAGGAGGATAATCGCACTCTAAGAGTGATGCTGGAAACTCTGAGCAGCAAATGCGAGAAGCTTCAATCTCATCTTCAAGAAATCAATAATGAGGAACAACAAGTGGGCACGAAGTCAGACCAAAGTGGATCAGTATTATTAGCTAGACCCGAGTTTTCCATGGCACAAAAGCCATCACAAATCTTTTTTAAAACCCACCCCAAGGACAATAGTTTGATGGTAAAAGATGGTTATCAGTGGAAGAAGTATGGACAGAAGAAGGTTACCAAAGACAATCCTTCGCCTAGAGCTTATTTCAAGTGCTCCCTGGCTCCTAGCTGCCCCGTCAAGAAAAGGGTGCAAAGAAGCATACAGGATAAGTCTATCCTTGTTGCAACTTATGAAGGAAAGCACAACCATGGTGTTTTTCACGATTTACTCAAGCCATCATCTTCTATACCCGAAACCTCAATAATGATTAATAATTTACCTATGACAAACATGCCTAACGACAAAGATACGGTGAACATTGACCTGGCTCTATGTAATTGGGATCAAACAGATATAAGACTTTGTGATGATGTTAAGCAACAGAACGACCGTGGCAGCAAAAGCAAAATTGAAGGATATGTAAGTCCTCTAGTTAAAGATCCTGACTTCATCATGCCATTAGCTGAAGCAGTTGTCCACTCCCTCAAGAGCCAGACTTATAAGCAAGTGGGTCTTAACCTGAATTTGGGTCTTCCAGAACCTCATTTGTGA 786 0.4173 MDQEVETLEAKLQRVKEDNRTLRVMLETLSSKCEKLQSHLQEINNEEQQVGTKSDQSGSVLLARPEFSMAQKPSQIFFKTHPKDNSLMVKDGYQWKKYGQKKVTKDNPSPRAYFKCSLAPSCPVKKRVQRSIQDKSILVATYEGKHNHGVFHDLLKPSSSIPETSIMINNLPMTNMPNDKDTVNIDLALCNWDQTDIRLCDDVKQQNDRGSKSKIEGYVSPLVKDPDFIMPLAEAVVHSLKSQTYKQVGLNLNLGLPEPHL* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0522 261 PANTHER WRKY TRANSCRIPTION FACTOR 49 2 241 - -
Gso4g0522 261 SMART WRKY_cls 89 150 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso4g0522 261 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 2 241 IPR044810 GO:0003700
Gso4g0522 261 Gene3D WRKY domain 74 150 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso4g0522 261 ProSiteProfiles WRKY domain profile. 84 151 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso4g0522 261 Coils Coil 5 49 - -
Gso4g0522 261 Pfam WRKY DNA -binding domain 90 148 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso4g0522 261 SUPERFAMILY WRKY DNA-binding domain 86 150 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0522 Gso-Chr4 4969372 4970781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0522 64 247 WRKY Transcription Factor Family AT1G80840 40.206 4.03e-38 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso4g0522 WRKY 6.7e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0522 - - gmx:100817211 454.521