Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0515 ATGGCTGGTTCCTCTGCTTCTCTTTTGTTCCTTTTCCTTCTCTTTGGATTCTCAGCAGCTAAGGAGCTATTGGTTGGAGGCAAAATAGATGCTTGGAAGATTCCATCTTCTGAATCAGATACCCTCAATCAATGGGCTGAAAGGTCTCGTTTCAGAGTGGGCGATCATCTAGTGTGGAAATATGAGAGTGGGAAGGACTCAGTGTTGGAAGTAACAAGGGAAGATTATGCTAATTGCAGCACATCCAACCCCATCAAAGAGTACAATGATGGAAACACTAAGGTGAAGCTTGAACATCCTGGTCCATTTTACTTCATCAGTGGATCAAAGGGGCACTGTGAGAAGGGGCAAAAGTTGATTGTGGTGGTAATGTCTCCAAGGCACACATTCACTGCCATTATTTCTCCAGCACCAACACCTTCTCCAGCAGAGTTCGAGGGTCCCGCTGTTGCTCCTACTAGCAGTGCCTCAACGTTTCAAGTTGGCCTTCTCACTGCTCTTGGAGTTTTGGCTATTTATGTGGGTTTTCTCATGTAA 537 0.4544 MAGSSASLLFLFLLFGFSAAKELLVGGKIDAWKIPSSESDTLNQWAERSRFRVGDHLVWKYESGKDSVLEVTREDYANCSTSNPIKEYNDGNTKVKLEHPGPFYFISGSKGHCEKGQKLIVVVMSPRHTFTAIISPAPTPSPAEFEGPAVAPTSSASTFQVGLLTALGVLAIYVGFLM* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0515 178 Gene3D - 19 128 IPR008972 -
Gso4g0515 178 SUPERFAMILY Cupredoxins 20 124 IPR008972 -
Gso4g0515 178 Pfam Plastocyanin-like domain 32 117 IPR003245 GO:0009055
Gso4g0515 178 PANTHER EARLY NODULIN-LIKE PROTEIN 3 5 171 - -
Gso4g0515 178 CDD OsENODL1_like 21 124 IPR041846 -
Gso4g0515 178 PANTHER BLUE COPPER PROTEIN 5 171 IPR039391 GO:0009055
Gso4g0515 178 ProSiteProfiles Phytocyanin domain profile. 21 125 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0515 Gso-Chr4 4924878 4926069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0515 7 162 Phytocyanin Superfamily AT2G25060 56.688 3.03e-60 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0515 - - gmx:100305551 339.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0515 4 4924878 4926069 Gso6g0511 6 4670832 4671930 GST
Gso14g0890 14 10432432 10433950 Gso4g0515 4 4924878 4926069 PCT
Gso17g1891 17 37837916 37839099 Gso4g0515 4 4924878 4926069 PCT
Gso4g0515 4 4924878 4926069 Gso14g0890 14 10432432 10433950 PCT
Gso4g0515 4 4924878 4926069 Gso17g1891 17 37837916 37839099 PCT