Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0504 ATGGGTTATCTCAATTCAGTTTTGTCATCTTCAAGCCAGGTTCATGTTGCAGATGATGCAATTGTGAGCGGCGGGGGTCTAAGTCACAATGGAAAATTCAGCTACGGGTATGCTAGCTCTCCTGGCAAGAGATCTTCAATGGAAGATTTTTATGAGACAAGAATTGATGGTGTTGAAGGTGAAATTGTTGGCCTTTTCGGAGTTTTTGATGGTCATGGTGGTGCTCGTGCTGCTGAGTATGTCAAGAAAAACCTGTTTAGTAATTTGATCAGTCACCCAAAATTCATTTCTGACACCAAATCAGCAATAACTGATGCATACAATCATACTGACACTGAGTTGCTGAAATCAGAAAATAGCCATAACAGAGATGCAGGATCAACTGCTTCCACTGCTATTTTAGTTGGTGACCGCTTGCTTGTTGCAAATGTTGGGGATTCCAGAGCTGTTATATGCAGGGGTGGTAATGCCATTGCTGTTTCTCGAGATCACAAACCAGACCAAACTGATGAGAGGCAAAGGATTGAAGAAGCAGGAGGCTTTGTTATGTGGGCAGGAACTTGGAGAGTTGGAGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATAGACTCCTGAAGCAGTATGTTGTTGCTGATCCAGAAATTCAGGAAGAAAAAGTTGACAGCTCCCTTGAGTTTCTTATTCTGGCCAGTGACGGGCTATGGGATGTTGTCTCTAATGAGGAAGCTGTTGCTATGATAAAGCCAATTGAGGATGCAGAGGAGGCAGCAAAGAGGCTGATGCAAGAAGCATATCAGAGAGGTAGTGCTGACAATATCACATGTGTTGTTGTTCGTTTCTTGATGAACCAAGGTGGATCCAAAGAGTTAGTAGCTTATCCTCATAATAGTAGCTCTGCGGGTAAGAATCCTTCAGTAGAAGGTTTGTGTGATATATAG 939 0.4302 MGYLNSVLSSSSQVHVADDAIVSGGGLSHNGKFSYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKKNLFSNLISHPKFISDTKSAITDAYNHTDTELLKSENSHNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEEAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNEEAVAMIKPIEDAEEAAKRLMQEAYQRGSADNITCVVVRFLMNQGGSKELVAYPHNSSSAGKNPSVEGLCDI* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0504 312 SMART PP2C_SIG_2 45 280 IPR001932 -
Gso4g0504 312 ProSitePatterns PPM-type phosphatase domain signature. 65 73 IPR000222 GO:0043169
Gso4g0504 312 PANTHER ALPHABET, ISOFORM E-RELATED 3 310 - -
Gso4g0504 312 SMART PP2C_4 24 278 IPR001932 -
Gso4g0504 312 CDD PP2Cc 33 280 IPR001932 -
Gso4g0504 312 Pfam Protein phosphatase 2C 63 273 IPR001932 -
Gso4g0504 312 PANTHER PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE TYPE 2C 3 310 - -
Gso4g0504 312 ProSiteProfiles PPM-type phosphatase domain profile. 34 280 IPR001932 -
Gso4g0504 312 Gene3D - 26 284 IPR036457 -
Gso4g0504 312 SUPERFAMILY PP2C-like 28 280 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0504 Gso-Chr4 4825893 4830640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0504 1 286 PP2C-type Phosphatase Gene Family AT4G31750 91.259 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0504 K17506 - gmx:100797070 618.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0504 4 4825893 4830640 Gso6g0498 6 4580508 4584959 GST