Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0486 ATGAGTTCTAAAAAGATTACATGGAAGTCGATAGTGTTGATCTTAAGTTGTTACAAGACTCAATGTCACTTGCAGGATTCAGAGAAACAGGTTTTAAAACAAGGTTCATTCCAAAGGTTATGCCTCTCGGATATAAGCATTCCTAGCTCCCCTCAGGCCATTGAAGATCTTTCCATTTCCATTTCCCTGGTTGGCCCAAAGTTGTACACATTCCCACTAGATGAGCTGAGGGAAGCAACACACAATTTCTCATGGAATAATTTTCTCGGTGAAGGCGGGTTTGGACCCGTGTACAAGGGTTTCGTTGATGACAAACTTAGACTTGGTTTGAAGGCTCAGCCTGTGGCTGTGAAACAACTGGACTTGGATGGCTTGCAAGGTCACAGGGAGTGGCTGGCAGAAATTATATTTCTTGGACAGCTGAGACATCCGCATCTTGTTAAGTTAATTGGGTACTGCTGTGAGGATGAGGACAGGCTTCTGGTGTATGAATACATGGCAAGAGGCAGCTTGGAGAATCAACTGCACAGAAGATACTCTGCTGCCTTACCATGGTCAACAAGGATGAAGATTGCATTGGGTGCAGCCAGGGGTCTGGCCTTCCTTCATGAAGCAGATAAACCTGTAATATACAGAGATTTCAAAACTTCAAATATCCTACTAGACTCGGATTACATAGCTAAACTATCAGACCTTGGGCTAGCAAAGGATGGTCCTGAAGGGGAAGACACACATGTAACAACAACATGCATAATGGGAACCCGAGGCTATGCTGCTCCTGAGTACATCATGTCAGGTCACCTTTCCACCAAGAGTGATGTGTATAGCTATGGAGTGGTTTTGTTGGAATTGCTTACAGGAAGAAGGGTAGTGGATATGTGCCGGCCGAATCGAGAACGAAGCCTGGTGGAATGGGCAAGGCCTCTTTTGAGAGATCAAAGAAAGCTGTACCATATAATAGACCCAAGATTGGAAGGGCAGTTTCCTATGAAAGGAGCTTTGAAGGTTGCTGCATTGACTTACAAATGCTTGAGCCACCACCCCAATCCAAGGCCTTCTATGAGTGATGTTGTAAAAATATTAGAATCACTTCAGGACTTGGATGATGTGATCATAGGACCATTTGTATATGTCGCGGGGTGA 1143 0.4453 MSSKKITWKSIVLILSCYKTQCHLQDSEKQVLKQGSFQRLCLSDISIPSSPQAIEDLSISISLVGPKLYTFPLDELREATHNFSWNNFLGEGGFGPVYKGFVDDKLRLGLKAQPVAVKQLDLDGLQGHREWLAEIIFLGQLRHPHLVKLIGYCCEDEDRLLVYEYMARGSLENQLHRRYSAALPWSTRMKIALGAARGLAFLHEADKPVIYRDFKTSNILLDSDYIAKLSDLGLAKDGPEGEDTHVTTTCIMGTRGYAAPEYIMSGHLSTKSDVYSYGVVLLELLTGRRVVDMCRPNRERSLVEWARPLLRDQRKLYHIIDPRLEGQFPMKGALKVAALTYKCLSHHPNPRPSMSDVVKILESLQDLDDVIIGPFVYVAG* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0486 380 Pfam Protein tyrosine and serine/threonine kinase 86 361 IPR001245 GO:0004672|GO:0006468
Gso4g0486 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Gso4g0486 380 SUPERFAMILY Protein kinase-like (PK-like) 64 363 IPR011009 -
Gso4g0486 380 Gene3D Transferase(Phosphotransferase) domain 1 166 371 - -
Gso4g0486 380 PANTHER OS01G0588500 PROTEIN-RELATED 21 379 - -
Gso4g0486 380 Gene3D Phosphorylase Kinase; domain 1 49 165 - -
Gso4g0486 380 CDD STKc_IRAK 89 364 - -
Gso4g0486 380 ProSiteProfiles Protein kinase domain profile. 83 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g0486 380 PANTHER KINASE 1B 21 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0486 Gso-Chr4 4605777 4608967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0486 48 361 Glycoside Hydrolase AT3G07070 49.231 8.10e-99 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gso4g0486 PK_Tyr_Ser-Thr 2.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0486 - - gmx:100805771 771.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0486 4 4605777 4608967 Gso6g0469 6 4310484 4312944 GST