Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0482 ATGCCAGAACCAACCATGAGTCTGCGCCACGGCACCAAGGTTTGGGTCCACGATAGAGATTCCGCTTGGATTCCCGCTGAAGTGCTCGAGTCTTCGGGAAAGAAAGTTACCGTTGCCACCGCTTCCGGCAAGAAGGTTGTTTTTCTTCCGGAGAACGTGTTTCCCAGGGATGCTGATGAAGAAGAGCACGGCGGAGTCGAAGATATGACGAGGTTGGCTTACTTGAATGAGCCAGGGGTGTTGTACAATCTCCAGAGAAGATATGCACTGAACGATATTTATACATATACAGGGAGCATTTTAATAGCTGTTAATCCATTCACAAAGCTTCCTCATTTGTATGATATCCATATGATGGAGCAGTATAAGGGAGCTCTGTTTGGTGAGCTTAGTCCACATGTATTTGCTGTTGCCGATGCATCTTATAGAGCAATGATGAATGGAGGTCAAAGCCAATCTATCTTGGTCAGCGGTGAAAGTGGTGCTGGGAAAACTGAGACAACAAAATTGATTATGCAATATCTTACGTATGTTGGTGGGCGTGCTGCTGGTGATGATAGAACAGTTGAACAACAAGTTCTTGAATCAAATCCACTTTTAGAGGCATTTGGAAACGCAAGGACTGTCAGGAATGACAATTCAAGCCGATTTGGGAAGTTTGTTGAAATTCAGTTTGATTCAAATGGTAGAATATCTGGTGCTGCAATTAGAACTTACTTACTAGAAAGATCACGAGTAGTGCAGATAACAGATCCAGAAAGAAATTATCACTGCTTTTATCAATTGTGTGCATCTGAAAGGGATGTAGAAAAGTATAAGTTGGGAAAGCCAAGCCACTTCCACTATTTGAATCAAAGTAAAGTCTATGAATTAGATGGCGTAAGCAGTGCTGAAGAGTACATGAAGACGAGGAGAGCAATGGATATTGTTGGCATAAGTCTAGGGGATCAGGAAGCCATATTTTGCACCTTAGCTGCAATTTTACATTTGGGAAACATTGAATTTTCTCCTGGAAAAGAGCATGACTCGTCAGTAATAAAAGATGAAAAATCAAGATTTCATTTGCAGATGGCTGCTAATCTTTTCAGGTGTGATTTGAACCTACTGCTAGCAACACTATGCACCCGTTCAATACAAACCCGAGAAGGAAATATCATCAAAGCTCTTGACTGTAATGCTGCTGTCGCTGGTCGGGATGCTTTGGCAAAAACTGTCTATGCTCGTTTATTTGATTGGCTTGTTGATAAGATCAATAGTTCTGTCGGGCAAGATATCAGTTCCCAGAAGCAAATTGGAGTTTTGGATATATATGGTTTTGAGTGTTTTAAGGATAATAGTTTTGAGCAATTCTGCATCAATTTTGCAAATGAAAAGCTCCAGCAACATTTTAATCAGCATGTTTTCAAGATGGAGCAGGAAGAATACAGCAAAGAAGAAATCAACTGGAGTTACATTGAGTTTATAGACAACCAAGATGTTTTAGATTTGATTGAAAAGAAACCCATTGGTATTATTGCTTTGTTAGATGAAGCTTGCATGTTTCCAAAATCAACGCACGAAACATTCTCAACCAAGTTGTTTAAGCACTTCCTGTCACACCCTAGGTTAGAAAAGGAGAAGTTTTCTGAAACAGATTTTACCCTTTCTCATTATGCTGGAAAGGTCACTTACCATACAAACACCTTCTTAGACAAAAATCGTGATTATGTAGTCGTAGAACATTGTAATCTATTATCCTCTTCAAAATGCCCCTTTGTGTCGGCTCTTTTTCCTTTGCTATCAGAGGAATCTTCAAGGTCATCATACAAGTTTTCTTCTGTGGCTTCCAGATTTAAGCAACAACTTCAATCACTCATGGAAACACTTAACACAACAGAGCCTCATTACATTCGATGTGTCAAGCCGAATTCTTTGAATCGACCACAAAAGTTTGAGAATACTAGTGTCATACACCAATTACGCTGTGGGGGTGTCCTTGAGGCTGTTAGAATAAGTCTGGCAGGTTACCCCACTCGAAGGATTTACTCAGAGTTTGTAGATCGCTTTGGATTAATAGCTCCCGAATTTATGGATGGAAGTTATGATGACAAAGATGTAACTCTGAAAATATTGCAAAAGCTAAAGCTTGAGAATTTTCAGTTAGGTAGGACCAAGGTATTTCTCAGGGCTGGTCAAATTTGCATTTTAGACTCTAGACGTGCAGAAGTTTTGGACAATGCTGCAAAGTGTATTCAGCGTCGACTGCGGACATTTATTGCACGCCGGGATTTCATCTCAATCCAAGCTGCTGCTCTTTCTCTTCAAGCATGCTGCAGGGGATTCATTGGCCGAAAGTTATATGCTTCTAAACGGGAAACATCAGCAGCTATCTCCATTCAGAAATATATCCGTATGTGTTGGATGAGGCATGCTTATGTGAAATTATATTATTCAGCTATTATTGTACAGTCCAATGTTCGTGGTTTCACAACTCGTCAAAGGTTCTTGCATAGAAAAGAACACAAAGCTGCCACTTCTATTCAGGCCTATTGGAGGATGTGCAAGGTTCGGTCTGCCTTCCTAAAACATCAAAATTCAATTGTAGTTATACAATGCCTTTGGCGGTGTAAACAAGCAAAAAGAGAGCTTCGCAAACTTAAACATGAGGCTAATGAAGCTGGAGCCTTGCGTTTAGCTAAGAATAAACTTGAGAAACAATTGGAAGAGCTTACATGGCGTTTGCATCTTGAGAAAAAAATAAGGGTTTCTAATGAAGAGGCTAAGCATGTTGAGATTTCCAAGCTACAGAAGATGGTAGATGCTCTGAATCTTGAATTAGATGCAGCTAAACTAGCAACAATTAATGAGTGCGACAAAAATGCGGTTTTGCAAAATCAGTTGCAATTGTTAGTAAAGGAAAAATCTGCTTTAGAAAGAGAGCTAGTTGCAATGGATGAAGTGCGAAAGGAAAATGCTCTATTAAAGGGTTCATTGGATGCTTTTGAAAAGAAGAGCACCGCTTTGGAGCTCGAGCTTGTGAATGCTCGGAAAGACCATGATAAAACCATTCAGAAAATGAGGGAGTTTGAAGATAAGTGTTCTGAACTTGGGCAAAATGTCAAAAGTCTTGAGGAAAAGCTCTCAATTTTAGAGGATGAAAATCACGTGCTTCGGCAGAAAGCCTTAAGTGTCTCTCCTAAGAGTAACCATCGAGGTTTGACAAAGTCATTATCTGAAAAATACTCAAGCGCAATAGCCCCCTGCACCGAGCAGAAGCCCACATTTGAATCGCCCGCACCTACAAAACTTATTTCCCATATTACACATGGCGGCTTGTCAGACTCTCGTCGATCAAAATTAACAGCAGAGAAGCACCAGGATAACTATGAACTCCTCTCTAGGTGCATCAAAGAGGATTTGGGGTTCAAAAATGGTAAACCTCTGGCAGCTAGTATCATATACAAATGTCTTCATCATTGGCATGCATTTGAATCTGAGCGCACAGCCATATTTGATTACATAGTTGATGGAATTAATGATGTTCTTAAGGTTAGAGACAATGACATTGTCTTGCCATATTGGCTGTCCAATACATCTGCACTTCTATGCCTCTTGCAAAGGAACTTGCATCCAAATGGTTTTTTAACAACCACTGCTCAACGTTATGCCAGATCATCTGGCTTGACCAGCCGAATAGGGAATGGACTGAGGTCTCCATTGAAGCTTATTGTATATGATGATAATACATCACAGGTGGAGGCAAGATATCCAGCTATTCTTTTTAAACAACAACTAACTGCTTGCGTAGAGAAGATTTTTGGCCTTATACGTGATAATTTGAAAAAGGAGCTGTCTCCACTTCTGGGATCATGTATTCAGGCACCTAAGGCTAAAATGGGTCGAGTGCAAGGTGGAAAATCATCTAGATCTCCTGGTGGGCTTCCTCAACAATCACCTGTTGCTCAATGGGACAACATCATCAATTTTTTGGATTCTCTCATGAGCCGCTTATGTGCAAATCATGTACCATCCTTCTTCATCCGCAAGCTAGTTACTCAGGTTTTTTCCTTCATCAATATTACACTCTTCAACAGCCTTCTGTTGCGGCGTGAATGTTGTACTTTCTCAAATGGTGAATATGTTAAGTCTGGTCTCGCAGAACTTGAGAAATGGATAGCAAATGCAAAAGAGGAGTATGCAGGAACGTCCTGGCATGGGCTGAATTATATAAGACAAGCTGTTGGGTTTCTGGTAATACATCAGAAGAGGAAAAAATCTTTGGAAGAAATTCGGCAGGATCTTTGTCCGGCATTGACTGTGAGGCAAATTTATCGAATCAGTACTATGTACTGGGACGACAAGTATGGAACCCAGAGTGTGTCCAATGAGGTAGTTAGTGAAATGAGGGAAATTGTGAGCAAGGACAATCAGTGTTTGAGCTCTAATTCATTCTTGTTGGATGATGATATGAGCATTCCTTTTTCTGCTGAAGACATAGATAAGGCAATCCCTGCTATAAATACTGTTGATATCGATCTTCCAGCATTTTTGTGTGAATATCCCTGTGCCCAGTTTCTTATTTTACATGAGAAGTAA 4575 0.4037 MPEPTMSLRHGTKVWVHDRDSAWIPAEVLESSGKKVTVATASGKKVVFLPENVFPRDADEEEHGGVEDMTRLAYLNEPGVLYNLQRRYALNDIYTYTGSILIAVNPFTKLPHLYDIHMMEQYKGALFGELSPHVFAVADASYRAMMNGGQSQSILVSGESGAGKTETTKLIMQYLTYVGGRAAGDDRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDSNGRISGAAIRTYLLERSRVVQITDPERNYHCFYQLCASERDVEKYKLGKPSHFHYLNQSKVYELDGVSSAEEYMKTRRAMDIVGISLGDQEAIFCTLAAILHLGNIEFSPGKEHDSSVIKDEKSRFHLQMAANLFRCDLNLLLATLCTRSIQTREGNIIKALDCNAAVAGRDALAKTVYARLFDWLVDKINSSVGQDISSQKQIGVLDIYGFECFKDNSFEQFCINFANEKLQQHFNQHVFKMEQEEYSKEEINWSYIEFIDNQDVLDLIEKKPIGIIALLDEACMFPKSTHETFSTKLFKHFLSHPRLEKEKFSETDFTLSHYAGKVTYHTNTFLDKNRDYVVVEHCNLLSSSKCPFVSALFPLLSEESSRSSYKFSSVASRFKQQLQSLMETLNTTEPHYIRCVKPNSLNRPQKFENTSVIHQLRCGGVLEAVRISLAGYPTRRIYSEFVDRFGLIAPEFMDGSYDDKDVTLKILQKLKLENFQLGRTKVFLRAGQICILDSRRAEVLDNAAKCIQRRLRTFIARRDFISIQAAALSLQACCRGFIGRKLYASKRETSAAISIQKYIRMCWMRHAYVKLYYSAIIVQSNVRGFTTRQRFLHRKEHKAATSIQAYWRMCKVRSAFLKHQNSIVVIQCLWRCKQAKRELRKLKHEANEAGALRLAKNKLEKQLEELTWRLHLEKKIRVSNEEAKHVEISKLQKMVDALNLELDAAKLATINECDKNAVLQNQLQLLVKEKSALERELVAMDEVRKENALLKGSLDAFEKKSTALELELVNARKDHDKTIQKMREFEDKCSELGQNVKSLEEKLSILEDENHVLRQKALSVSPKSNHRGLTKSLSEKYSSAIAPCTEQKPTFESPAPTKLISHITHGGLSDSRRSKLTAEKHQDNYELLSRCIKEDLGFKNGKPLAASIIYKCLHHWHAFESERTAIFDYIVDGINDVLKVRDNDIVLPYWLSNTSALLCLLQRNLHPNGFLTTTAQRYARSSGLTSRIGNGLRSPLKLIVYDDNTSQVEARYPAILFKQQLTACVEKIFGLIRDNLKKELSPLLGSCIQAPKAKMGRVQGGKSSRSPGGLPQQSPVAQWDNIINFLDSLMSRLCANHVPSFFIRKLVTQVFSFINITLFNSLLLRRECCTFSNGEYVKSGLAELEKWIANAKEEYAGTSWHGLNYIRQAVGFLVIHQKRKKSLEEIRQDLCPALTVRQIYRISTMYWDDKYGTQSVSNEVVSEMREIVSKDNQCLSSNSFLLDDDMSIPFSAEDIDKAIPAINTVDIDLPAFLCEYPCAQFLILHEK* 1525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0482 1524 ProSiteProfiles Myosin motor domain profile. 64 734 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso4g0482 1524 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 9 58 IPR004009 GO:0003774|GO:0005524|GO:0016459
Gso4g0482 1524 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 784 883 IPR027417 -
Gso4g0482 1524 Gene3D - 12 56 IPR008989 GO:0003774|GO:0005524|GO:0051015
Gso4g0482 1524 PRINTS Myosin heavy chain signature 94 113 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso4g0482 1524 PRINTS Myosin heavy chain signature 151 176 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso4g0482 1524 PRINTS Myosin heavy chain signature 198 225 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso4g0482 1524 PRINTS Myosin heavy chain signature 430 458 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso4g0482 1524 PRINTS Myosin heavy chain signature 483 511 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso4g0482 1524 Gene3D - 669 735 - -
Gso4g0482 1524 SMART DIL_2 1342 1449 IPR002710 -
Gso4g0482 1524 CDD MyosinXI_CBD 1116 1490 IPR037975 GO:0007015
Gso4g0482 1524 ProSiteProfiles IQ motif profile. 833 860 IPR000048 GO:0005515
Gso4g0482 1524 CDD MYSc_Myo11 78 722 IPR036018 -
Gso4g0482 1524 SMART MYSc_2a 58 735 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso4g0482 1524 Coils Coil 925 945 - -
Gso4g0482 1524 Gene3D - 254 311 - -
Gso4g0482 1524 Gene3D Kinesin motor domain 67 664 IPR036961 -
Gso4g0482 1524 PANTHER PROTEIN OPAQUE1-LIKE 8 1521 - -
Gso4g0482 1524 Coils Coil 869 913 - -
Gso4g0482 1524 PANTHER MYOSIN 8 1521 - -
Gso4g0482 1524 Pfam Myosin N-terminal SH3-like domain 11 48 IPR004009 GO:0003774|GO:0005524|GO:0016459
Gso4g0482 1524 Gene3D Myosin VI head, motor domain, U50 subdomain 313 603 - -
Gso4g0482 1524 Coils Coil 953 1053 - -
Gso4g0482 1524 Pfam DIL domain 1343 1446 IPR002710 -
Gso4g0482 1524 SMART iq_5 855 877 IPR000048 GO:0005515
Gso4g0482 1524 SMART iq_5 784 806 IPR000048 GO:0005515
Gso4g0482 1524 SMART iq_5 807 829 IPR000048 GO:0005515
Gso4g0482 1524 SMART iq_5 759 781 IPR000048 GO:0005515
Gso4g0482 1524 SMART iq_5 832 854 IPR000048 GO:0005515
Gso4g0482 1524 SMART iq_5 736 758 IPR000048 GO:0005515
Gso4g0482 1524 Pfam Myosin head (motor domain) 66 722 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso4g0482 1524 Pfam IQ calmodulin-binding motif 786 805 IPR000048 GO:0005515
Gso4g0482 1524 Pfam IQ calmodulin-binding motif 858 877 IPR000048 GO:0005515
Gso4g0482 1524 Pfam IQ calmodulin-binding motif 834 853 IPR000048 GO:0005515
Gso4g0482 1524 Pfam IQ calmodulin-binding motif 739 757 IPR000048 GO:0005515
Gso4g0482 1524 Pfam IQ calmodulin-binding motif 762 780 IPR000048 GO:0005515
Gso4g0482 1524 Pfam IQ calmodulin-binding motif 811 828 IPR000048 GO:0005515
Gso4g0482 1524 ProSiteProfiles IQ motif profile. 760 789 IPR000048 GO:0005515
Gso4g0482 1524 Gene3D - 440 625 - -
Gso4g0482 1524 ProSiteProfiles IQ motif profile. 808 837 IPR000048 GO:0005515
Gso4g0482 1524 Gene3D - 787 834 - -
Gso4g0482 1524 Gene3D - 736 786 - -
Gso4g0482 1524 Gene3D - 835 884 - -
Gso4g0482 1524 ProSiteProfiles Dilute domain profile. 1165 1467 IPR002710 -
Gso4g0482 1524 ProSiteProfiles IQ motif profile. 856 885 IPR000048 GO:0005515
Gso4g0482 1524 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 781 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0482 Gso-Chr4 4551581 4574323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0482 6 1520 Myosins gene family AT4G33200 72.889 0.0 2236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0482 K10357 - gmx:100804699 3009.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0482 4 4551581 4574323 Gso6g0463 6 4249785 4264801 GST
Gso4g0482 4 4551581 4574323 Gso14g0861 14 9670064 9700084 PCT