Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso4g0481 | ATGGCGTTTCGGTTTGGACTACTCCTTCTGTTTTCTCTCCTTTGTTTGGATTCAATTGGTTCGGTGAATTCACACGACGGAGAAACGTTGTTGGAGATAAAGAAGTCGTTCAGTGATGTAGATAACGTTCTGTATGACTGGACAGACTCACCTTCTTCAGATTATTGTGTTTGGAGAGGGGTTACGTGTGATAATGTCACTTTCAACGTGGTTGCACTCAATCTTTCAGGGTTGAATCTTGAGGGCGAAATTTCACCTGTAATAGGGAGACTTAACAGCTTGGTCTCTATTGATTTCAAGGAAAACCGTTTATCTGGCCAGATACCTGACGAGCTTGGTGATTGTTCCTCTTTGAAAAGCATAGACTTGTCATTTAATGAGATTCGGGGGGATATACCGTTTTCGGTTTCGAAGATGAAACAGCTGGAAAATCTAATTTTGAAAAATAATCAGCTAATTGGACCAATTCCTTCAACTCTCTCTCAGGTTCCTAACTTGAAGATTCTAGACCTGGCACAGAATAATCTTAGCGGGGAGATACCAAGACTTATATACTGGAATGAAGTTTTACAATATCTTGGCTTGCGAGGTAACAATTTGGTGGGTTCACTTTCTCCAGACATGTGCCAGTTAACTGGATTGTGGTACTTTGACGTGAGAAACAATAGCTTGACAGGCACTATTCCTGAAAACATAGGCAATTGTACTACTTTAGGGGTCTTGGATTTATCCTACAACAAGCTAACCGGAGAGATACCATTCAATATTGGGTATCTGCAAGTAGCAACTCTGTCATTGCAAGGCAATAAATTCTTGGGGCATATTCCATCAGTGATTGGTCTGATGCAAGCGCTTACTGTCTTAGATTTGAGTTGTAATATGTTAAGTGGACCAATCCCTCCTATCTTGGGAAATTTGACCTACACAGAAAAATTGTATTTGCATGGAAACAAGCTGACTGGCCTCATCCCCCCAGAACTTGGAAATATGACAAACCTTCACTATTTGGAATTGAATGACAACCATTTAAGTGGACATATCCCACCTGAGCTTGGAAAGCTTACTGATTTGTTTGACTTAAATGTCGCCAACAACAACCTTGAGGGTCCAGTTCCTGATAATCTTAGCTCATGTAAAAACCTCAACAGCCTCAATGTGCATGGGAATAAGCTGAGTGGAACAGTCCCCTCAGCTTTTCATAGCTTGGAGAGTATGACCTATCTTAATCTTTCTTCAAACAATCTTCAAGGCTCCATTCCAATTGAACTCTCACGGATTGGTAATTTGGATACACTGGATATATCAAATAATAATATAATTGGTTCTATTCCTTCTTCCATTGGTGACTTGGAACATCTTCTGAAGTTGAATCTGAGCAGAAATCATTTAACAGGGTTTATTCCAGCAGAATTTGGAAATCTAAGAAGTGTCATGGATATTGATCTTTCAAATAATCAACTCTCTGGCTTGATTCCTGAAGAACTTAGTCAGCTTCAGAACATTATATCCTTGAGACTAGAAAAGAACAAATTATCCGGGGACGTGTCTTCACTTTTAAATTGCTTTAGTCTTTCTCTACTTAATGTCTCTTATAACAACCTAGTTGGTGTTATTCCCTCAAGCAAGAATTTTTCCAGGTTTTCCCCTGACAGTTTTATTGGAAATCCTGGTCTTTGTGTCGATTGGCTGGATTCGTCTTGTCTTGGGTCTCACTCTACAGAGCGAGTTACCTTGTCCAAGGCAGCTATCCTAGGAATTGCAATAGGCGCCCTTGCGATTCTTTTTATGATATTGCTAGCAGCTTGCCGACCACACAATCCAGCTTCCTTCTCTGATGATGGATCTTTTGACAAACCAGTTAATTACTCACCTCCAAAGCTAGTGATTCTTCACATGAATATGGCACTTCATGTGTATGATGATATCATGAGGATGACCGAAAACCTAAGTGAGAAGTATATAATTGGGTATGGTGCATCGAGTACAGTTTATAAATGTGTTCTTAAGAATTGCAAGCCGGTGGCTATCAAGAAGCTCTATTCTCACTATCCGCAATATTTGAAAGAGTTTGAGACTGAGCTTGAGACAGTTGGCAGCATTAAGCACAGGAATCTGGTCAGTCTCCAAGGCTACTCATTGTCTCCATACGGAAATCTTCTCTTTTATGACTACATGGAAAATGGCAGTATATGGGATCTTCTACATGGACCTACCAAGAAGAAAAAGCTTGATTGGGATCTTCGTCTAAAAATAGCACTTGGATCGGCCCAAGGACTTTCTTATCTGCACCACGATTGCAGTCCACGTATCATTCACAGGGATGTGAAATCATCTAATATTTTACTTGACAAAGATTTTGAGCCCCATCTCACCGATTTTGGCATTGCAAAAAGTCTCTGTCCATCTAAGACCCACACTTCAACTTACATAATGGGCACAATTGGCTATATAGATCCAGAGTATGCTAGGACTTCTCGCCTCACTGAGAAGTCTGATGTGTATAGCTATGGTATTGTATTGCTTGAGCTCCTGACTGGAAGGAAAGCTGTTGACAATGAATCAAACCTCCACCATCTGATTTTGTCCAAGACAGCTAATGATGGTGTAATGGAAACCGTTGATCCAGATATTACTGCTACATGCAAGGACATGGGAGCAGTAAAAAAGGTTTTTCAGCTTGCTCTTTTATGCACAAAGAAGCAACCAGTTGATAGGCCTACAATGCATGAGGTGACTCGTGTGCTGGCAAGCCTTGTGCCATCCATCACTCCACCAAAACAAACTGACCAAACACAAGTAGTGCTATCTGATTCACAGCCATCTGCTAAAATGCAATGCTACAAGGATGAATATGCAAATCTTACAACTCCACACCTTGTGAACTGTCCATCCATGAGCACCTCTGATGCCCAACTCTTCCTCAAATTTGGAGAAGTAATATCACAAAACAGTCACTGA | 2958 | 0.4067 | MAFRFGLLLLFSLLCLDSIGSVNSHDGETLLEIKKSFSDVDNVLYDWTDSPSSDYCVWRGVTCDNVTFNVVALNLSGLNLEGEISPVIGRLNSLVSIDFKENRLSGQIPDELGDCSSLKSIDLSFNEIRGDIPFSVSKMKQLENLILKNNQLIGPIPSTLSQVPNLKILDLAQNNLSGEIPRLIYWNEVLQYLGLRGNNLVGSLSPDMCQLTGLWYFDVRNNSLTGTIPENIGNCTTLGVLDLSYNKLTGEIPFNIGYLQVATLSLQGNKFLGHIPSVIGLMQALTVLDLSCNMLSGPIPPILGNLTYTEKLYLHGNKLTGLIPPELGNMTNLHYLELNDNHLSGHIPPELGKLTDLFDLNVANNNLEGPVPDNLSSCKNLNSLNVHGNKLSGTVPSAFHSLESMTYLNLSSNNLQGSIPIELSRIGNLDTLDISNNNIIGSIPSSIGDLEHLLKLNLSRNHLTGFIPAEFGNLRSVMDIDLSNNQLSGLIPEELSQLQNIISLRLEKNKLSGDVSSLLNCFSLSLLNVSYNNLVGVIPSSKNFSRFSPDSFIGNPGLCVDWLDSSCLGSHSTERVTLSKAAILGIAIGALAILFMILLAACRPHNPASFSDDGSFDKPVNYSPPKLVILHMNMALHVYDDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKKLYSHYPQYLKEFETELETVGSIKHRNLVSLQGYSLSPYGNLLFYDYMENGSIWDLLHGPTKKKKLDWDLRLKIALGSAQGLSYLHHDCSPRIIHRDVKSSNILLDKDFEPHLTDFGIAKSLCPSKTHTSTYIMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTGRKAVDNESNLHHLILSKTANDGVMETVDPDITATCKDMGAVKKVFQLALLCTKKQPVDRPTMHEVTRVLASLVPSITPPKQTDQTQVVLSDSQPSAKMQCYKDEYANLTTPHLVNCPSMSTSDAQLFLKFGEVISQNSH* | 986 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso4g0481 | 985 | SMART | LRR_typ_2 | 402 | 426 | IPR003591 | - | |
Gso4g0481 | 985 | SMART | LRR_typ_2 | 330 | 354 | IPR003591 | - | |
Gso4g0481 | 985 | SMART | LRR_typ_2 | 211 | 235 | IPR003591 | - | |
Gso4g0481 | 985 | SMART | LRR_typ_2 | 450 | 473 | IPR003591 | - | |
Gso4g0481 | 985 | SMART | LRR_typ_2 | 474 | 497 | IPR003591 | - | |
Gso4g0481 | 985 | SMART | LRR_typ_2 | 91 | 115 | IPR003591 | - | |
Gso4g0481 | 985 | SMART | LRR_typ_2 | 163 | 187 | IPR003591 | - | |
Gso4g0481 | 985 | SMART | LRR_typ_2 | 282 | 306 | IPR003591 | - | |
Gso4g0481 | 985 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERECTA | 6 | 972 | - | - | |
Gso4g0481 | 985 | SMART | serkin_6 | 649 | 922 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso4g0481 | 985 | Pfam | Protein kinase domain | 652 | 912 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso4g0481 | 985 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 770 | 782 | IPR008271 | GO:0004672|GO:0006468 | |
Gso4g0481 | 985 | Gene3D | Ribonuclease Inhibitor | 186 | 296 | IPR032675 | - | |
Gso4g0481 | 985 | Gene3D | Transferase(Phosphotransferase) domain 1 | 725 | 939 | - | - | |
Gso4g0481 | 985 | ProSiteProfiles | Protein kinase domain profile. | 649 | 922 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso4g0481 | 985 | Gene3D | Phosphorylase Kinase; domain 1 | 631 | 724 | - | - | |
Gso4g0481 | 985 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 6 | 972 | - | - | |
Gso4g0481 | 985 | SUPERFAMILY | L domain-like | 50 | 301 | - | - | |
Gso4g0481 | 985 | Pfam | Leucine rich repeat | 141 | 200 | IPR001611 | GO:0005515 | |
Gso4g0481 | 985 | Pfam | Leucine rich repeat | 452 | 511 | IPR001611 | GO:0005515 | |
Gso4g0481 | 985 | Pfam | Leucine rich repeat | 380 | 439 | IPR001611 | GO:0005515 | |
Gso4g0481 | 985 | SUPERFAMILY | Protein kinase-like (PK-like) | 626 | 915 | IPR011009 | - | |
Gso4g0481 | 985 | ProSitePatterns | Protein kinases ATP-binding region signature. | 655 | 678 | IPR017441 | GO:0005524 | |
Gso4g0481 | 985 | Pfam | Leucine rich repeat N-terminal domain | 24 | 64 | IPR013210 | - | |
Gso4g0481 | 985 | Gene3D | Ribonuclease Inhibitor | 23 | 185 | IPR032675 | - | |
Gso4g0481 | 985 | ProSiteProfiles | Leucine-rich repeat profile. | 165 | 187 | IPR001611 | GO:0005515 | |
Gso4g0481 | 985 | Gene3D | Ribonuclease Inhibitor | 297 | 569 | IPR032675 | - | |
Gso4g0481 | 985 | SUPERFAMILY | L domain-like | 260 | 547 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso4g0481 | Gso-Chr4 | 4537053 | 4547994 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso4g0481 | 93 | 919 | Receptor kinase-like Gene Family | AT5G07180 | 67.150 | 0.0 | 1127 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XIIIb | Gso4g0481 | Pkinase | 1.3e-42 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso4g0481 | K20718 | - | gmx:100804875 | 1914.04 |