Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso4g0454 | ATGTCTGTTCAACAGCCGCCATGTGCCGCCCCGCTGCAAAACACCACAATGGTGGCTGTTGACAAAGACAAAAACAGTGTTCATGCTTTCCGCTGGGCCGTTAATCACCTCGACAACCCCATCATCATTGCCGTCCATGTCAAGCACAAAAACTTTTCTCATCATGTCACCAATGTGTTTCCACCGGACGAAGAGGATGTAGCCAATATTTTCAATACCTTGCGTGGAATGTGTACCCGCAAAGCTGTCAAGATGAAAGAAGCCGTAATCGATGATAGTGATGTTGTGAGAGGACTTTTAGAGTATGCAAACAGGAATGCCATACATAGTATCGTGGTCGGTGCATCCACAAAAAACCCTTTGATAAGCCTCAAAAAATTTAAAACCTATCAGTATCAGGATATACCAACAGCCATGATCAAATCAGCCCCAGATTACTGCTCTGTGTACATAATTTCCAAATTGAAGATTGTGTCAGCTCGATCAGCGGTACGGTCAATGTCAAAAGGTTTTATGGCACCGAAACAACTTCCTGTGCAGGCATGCCCACCTAGTGAACCAGAAGGTGGATCAGTAAGGGGACAACCACCAAGAAGTAGGAGTACTTACGAAGGACCAGTAGAACCAATGAGAATACAGGCACGTGAGAGGCCAAGGAGTGCGGGTAGTATGTCAATAGACATTAACATTGATGTACACACTCATCCACGACATTGGTCAATGGATGAAAGAGAAATTGCAGGGCTTGTGACAATGGATGTGACTAAGCAAGATTCTATTCCTGATGTATCAGATTCCTTCGGGACATCAGGTCCTCAGTCCTCAAAAGAGCTTGAAGCCGAGATGAAAAGATTGAGGCTTGAACTGAAGCAAACTATGGACATGTACAGCTCAGCTTGCAAGCAAGCAATCTCAGCCAAAAATCAGGCAGAACAAATTCGTCAATGGAAAATGGAAGAGGACCGTAAGGTTGAGGTAGTTAGGTTGTCTCAAGAGGCAGCTCTTGCACTGGCAGAAAGGGAGAAGATTAGAGCCAAAGCTGCATTGGAAGCAGCTGAGGAGGCCAGGAGGAGGGCAGAACAGGATGCACAGAGAAGAAAGGATGCAGAGATGAAAGCCAGGTTAGAGGCAGAAGAGAAGGAACGTGCATTATCTGCGTTGGCTCATAACGATAACCGGTATAGAAAATACACTATAGTGGAGATTGAAGCAGCCACAGAAAAGTTCTACCCATTAAACAAAATTGGTGAAGGTGGATATGGACCTGTGTATAAAGGCCACCTTGATCACACCCCAGTTGCAATCAAAATTTTAAGGCCTGATGCTGTTCATGGCATGAAGCAGTTCCAACAAGAGATTGAGGTACTAAGCTGCATTAGACATCCGCATATGGTCCTCCTCCTCGGTGCATGTCCTGAGCATGGGTGCTTGGTGTATGAATACATGGATAATGGAAGCTTAGAAGATAGATTATACCGAAAAAATAACAGCAGGCCAATTTCATGGAGGAAACGGTTCCAAATAGCTGCTGAGATTGCAACTGCACTCCTCTTCTTACACCAAAACAAGCCAGAGCCTATTGTGCACAGAGACCTTAAACCATCAAACATTCTCTTGGACAGGAATTACGTGAGTAAAATCAGTGACGTTGGTCTGGCACGGTTAGTCCCCGCTTCTGTAGCTGATACTATGACACAATATTACATGACTTCCGCTGCTGGAACCTTTTGTTACATTGATCCTGAGTATCAACAAACGGGAATACTAACAACAAAGTCAGATGTATATTCTCTGGGGATAATGCTACTGCAGATAATCACAGCCAAGCCTCCCATGGGACTTGCTCACATAGTTAAGAAGGCAATTGAAAAGGGTAGGTTTGAAGAGATTCTTGACCCTGTGGTCACTGATTGGCCAGTGGAAGAGGCTCTATCATTTGCCAAATTAGCATTGAAGTGCTCAGAACTCAGCAAGAAGGACAGGCCAAACCTTGCAACAGTTGTGTTGCCAGAGCTTAATAGGTTAAGCGAACTTGAATTGACTTTACACAATGATCAAGTTTTTTACAGTAGTGAAGGTGTGATCAATAGCTATGCCGCTTGCCCTCCCACACCTCCAAGAAGTCATTACTCTGACTCAGAGACGTTATATACGATCTAG | 2160 | 0.4449 | MSVQQPPCAAPLQNTTMVAVDKDKNSVHAFRWAVNHLDNPIIIAVHVKHKNFSHHVTNVFPPDEEDVANIFNTLRGMCTRKAVKMKEAVIDDSDVVRGLLEYANRNAIHSIVVGASTKNPLISLKKFKTYQYQDIPTAMIKSAPDYCSVYIISKLKIVSARSAVRSMSKGFMAPKQLPVQACPPSEPEGGSVRGQPPRSRSTYEGPVEPMRIQARERPRSAGSMSIDINIDVHTHPRHWSMDEREIAGLVTMDVTKQDSIPDVSDSFGTSGPQSSKELEAEMKRLRLELKQTMDMYSSACKQAISAKNQAEQIRQWKMEEDRKVEVVRLSQEAALALAEREKIRAKAALEAAEEARRRAEQDAQRRKDAEMKARLEAEEKERALSALAHNDNRYRKYTIVEIEAATEKFYPLNKIGEGGYGPVYKGHLDHTPVAIKILRPDAVHGMKQFQQEIEVLSCIRHPHMVLLLGACPEHGCLVYEYMDNGSLEDRLYRKNNSRPISWRKRFQIAAEIATALLFLHQNKPEPIVHRDLKPSNILLDRNYVSKISDVGLARLVPASVADTMTQYYMTSAAGTFCYIDPEYQQTGILTTKSDVYSLGIMLLQIITAKPPMGLAHIVKKAIEKGRFEEILDPVVTDWPVEEALSFAKLALKCSELSKKDRPNLATVVLPELNRLSELELTLHNDQVFYSSEGVINSYAACPPTPPRSHYSDSETLYTI* | 720 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso4g0454 | 719 | Gene3D | HUPs | 9 | 127 | IPR014729 | - | |
Gso4g0454 | 719 | Gene3D | Transferase(Phosphotransferase) domain 1 | 482 | 690 | - | - | |
Gso4g0454 | 719 | Pfam | Protein kinase domain | 412 | 666 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso4g0454 | 719 | PANTHER | OS02G0152300 PROTEIN | 15 | 693 | - | - | |
Gso4g0454 | 719 | Pfam | Universal stress protein family | 17 | 121 | IPR006016 | - | |
Gso4g0454 | 719 | SUPERFAMILY | Adenine nucleotide alpha hydrolases-like | 16 | 121 | - | - | |
Gso4g0454 | 719 | Coils | Coil | 275 | 295 | - | - | |
Gso4g0454 | 719 | SUPERFAMILY | Protein kinase-like (PK-like) | 393 | 668 | IPR011009 | - | |
Gso4g0454 | 719 | MobiDBLite | consensus disorder prediction | 175 | 221 | - | - | |
Gso4g0454 | 719 | CDD | STK_N | 15 | 154 | - | - | |
Gso4g0454 | 719 | PANTHER | KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN | 15 | 693 | - | - | |
Gso4g0454 | 719 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 527 | 539 | IPR008271 | GO:0004672|GO:0006468 | |
Gso4g0454 | 719 | SMART | serkin_6 | 409 | 672 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso4g0454 | 719 | Gene3D | Phosphorylase Kinase; domain 1 | 378 | 481 | - | - | |
Gso4g0454 | 719 | ProSiteProfiles | Protein kinase domain profile. | 409 | 672 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso4g0454 | 719 | Coils | Coil | 335 | 372 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso4g0454 | Gso-Chr4 | 4308291 | 4312906 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso4g0454 | 85 | 678 | Receptor kinase-like Gene Family | AT5G12000 | 58.306 | 0.0 | 684 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-IXb | Gso4g0454 | Pkinase | 2.9e-43 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso4g0454 | - | - | gmx:100798861 | 1365.13 |