Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0454 ATGTCTGTTCAACAGCCGCCATGTGCCGCCCCGCTGCAAAACACCACAATGGTGGCTGTTGACAAAGACAAAAACAGTGTTCATGCTTTCCGCTGGGCCGTTAATCACCTCGACAACCCCATCATCATTGCCGTCCATGTCAAGCACAAAAACTTTTCTCATCATGTCACCAATGTGTTTCCACCGGACGAAGAGGATGTAGCCAATATTTTCAATACCTTGCGTGGAATGTGTACCCGCAAAGCTGTCAAGATGAAAGAAGCCGTAATCGATGATAGTGATGTTGTGAGAGGACTTTTAGAGTATGCAAACAGGAATGCCATACATAGTATCGTGGTCGGTGCATCCACAAAAAACCCTTTGATAAGCCTCAAAAAATTTAAAACCTATCAGTATCAGGATATACCAACAGCCATGATCAAATCAGCCCCAGATTACTGCTCTGTGTACATAATTTCCAAATTGAAGATTGTGTCAGCTCGATCAGCGGTACGGTCAATGTCAAAAGGTTTTATGGCACCGAAACAACTTCCTGTGCAGGCATGCCCACCTAGTGAACCAGAAGGTGGATCAGTAAGGGGACAACCACCAAGAAGTAGGAGTACTTACGAAGGACCAGTAGAACCAATGAGAATACAGGCACGTGAGAGGCCAAGGAGTGCGGGTAGTATGTCAATAGACATTAACATTGATGTACACACTCATCCACGACATTGGTCAATGGATGAAAGAGAAATTGCAGGGCTTGTGACAATGGATGTGACTAAGCAAGATTCTATTCCTGATGTATCAGATTCCTTCGGGACATCAGGTCCTCAGTCCTCAAAAGAGCTTGAAGCCGAGATGAAAAGATTGAGGCTTGAACTGAAGCAAACTATGGACATGTACAGCTCAGCTTGCAAGCAAGCAATCTCAGCCAAAAATCAGGCAGAACAAATTCGTCAATGGAAAATGGAAGAGGACCGTAAGGTTGAGGTAGTTAGGTTGTCTCAAGAGGCAGCTCTTGCACTGGCAGAAAGGGAGAAGATTAGAGCCAAAGCTGCATTGGAAGCAGCTGAGGAGGCCAGGAGGAGGGCAGAACAGGATGCACAGAGAAGAAAGGATGCAGAGATGAAAGCCAGGTTAGAGGCAGAAGAGAAGGAACGTGCATTATCTGCGTTGGCTCATAACGATAACCGGTATAGAAAATACACTATAGTGGAGATTGAAGCAGCCACAGAAAAGTTCTACCCATTAAACAAAATTGGTGAAGGTGGATATGGACCTGTGTATAAAGGCCACCTTGATCACACCCCAGTTGCAATCAAAATTTTAAGGCCTGATGCTGTTCATGGCATGAAGCAGTTCCAACAAGAGATTGAGGTACTAAGCTGCATTAGACATCCGCATATGGTCCTCCTCCTCGGTGCATGTCCTGAGCATGGGTGCTTGGTGTATGAATACATGGATAATGGAAGCTTAGAAGATAGATTATACCGAAAAAATAACAGCAGGCCAATTTCATGGAGGAAACGGTTCCAAATAGCTGCTGAGATTGCAACTGCACTCCTCTTCTTACACCAAAACAAGCCAGAGCCTATTGTGCACAGAGACCTTAAACCATCAAACATTCTCTTGGACAGGAATTACGTGAGTAAAATCAGTGACGTTGGTCTGGCACGGTTAGTCCCCGCTTCTGTAGCTGATACTATGACACAATATTACATGACTTCCGCTGCTGGAACCTTTTGTTACATTGATCCTGAGTATCAACAAACGGGAATACTAACAACAAAGTCAGATGTATATTCTCTGGGGATAATGCTACTGCAGATAATCACAGCCAAGCCTCCCATGGGACTTGCTCACATAGTTAAGAAGGCAATTGAAAAGGGTAGGTTTGAAGAGATTCTTGACCCTGTGGTCACTGATTGGCCAGTGGAAGAGGCTCTATCATTTGCCAAATTAGCATTGAAGTGCTCAGAACTCAGCAAGAAGGACAGGCCAAACCTTGCAACAGTTGTGTTGCCAGAGCTTAATAGGTTAAGCGAACTTGAATTGACTTTACACAATGATCAAGTTTTTTACAGTAGTGAAGGTGTGATCAATAGCTATGCCGCTTGCCCTCCCACACCTCCAAGAAGTCATTACTCTGACTCAGAGACGTTATATACGATCTAG 2160 0.4449 MSVQQPPCAAPLQNTTMVAVDKDKNSVHAFRWAVNHLDNPIIIAVHVKHKNFSHHVTNVFPPDEEDVANIFNTLRGMCTRKAVKMKEAVIDDSDVVRGLLEYANRNAIHSIVVGASTKNPLISLKKFKTYQYQDIPTAMIKSAPDYCSVYIISKLKIVSARSAVRSMSKGFMAPKQLPVQACPPSEPEGGSVRGQPPRSRSTYEGPVEPMRIQARERPRSAGSMSIDINIDVHTHPRHWSMDEREIAGLVTMDVTKQDSIPDVSDSFGTSGPQSSKELEAEMKRLRLELKQTMDMYSSACKQAISAKNQAEQIRQWKMEEDRKVEVVRLSQEAALALAEREKIRAKAALEAAEEARRRAEQDAQRRKDAEMKARLEAEEKERALSALAHNDNRYRKYTIVEIEAATEKFYPLNKIGEGGYGPVYKGHLDHTPVAIKILRPDAVHGMKQFQQEIEVLSCIRHPHMVLLLGACPEHGCLVYEYMDNGSLEDRLYRKNNSRPISWRKRFQIAAEIATALLFLHQNKPEPIVHRDLKPSNILLDRNYVSKISDVGLARLVPASVADTMTQYYMTSAAGTFCYIDPEYQQTGILTTKSDVYSLGIMLLQIITAKPPMGLAHIVKKAIEKGRFEEILDPVVTDWPVEEALSFAKLALKCSELSKKDRPNLATVVLPELNRLSELELTLHNDQVFYSSEGVINSYAACPPTPPRSHYSDSETLYTI* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0454 719 Gene3D HUPs 9 127 IPR014729 -
Gso4g0454 719 Gene3D Transferase(Phosphotransferase) domain 1 482 690 - -
Gso4g0454 719 Pfam Protein kinase domain 412 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g0454 719 PANTHER OS02G0152300 PROTEIN 15 693 - -
Gso4g0454 719 Pfam Universal stress protein family 17 121 IPR006016 -
Gso4g0454 719 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 16 121 - -
Gso4g0454 719 Coils Coil 275 295 - -
Gso4g0454 719 SUPERFAMILY Protein kinase-like (PK-like) 393 668 IPR011009 -
Gso4g0454 719 MobiDBLite consensus disorder prediction 175 221 - -
Gso4g0454 719 CDD STK_N 15 154 - -
Gso4g0454 719 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 15 693 - -
Gso4g0454 719 ProSitePatterns Serine/Threonine protein kinases active-site signature. 527 539 IPR008271 GO:0004672|GO:0006468
Gso4g0454 719 SMART serkin_6 409 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g0454 719 Gene3D Phosphorylase Kinase; domain 1 378 481 - -
Gso4g0454 719 ProSiteProfiles Protein kinase domain profile. 409 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g0454 719 Coils Coil 335 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0454 Gso-Chr4 4308291 4312906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0454 85 678 Receptor kinase-like Gene Family AT5G12000 58.306 0.0 684
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Gso4g0454 Pkinase 2.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0454 - - gmx:100798861 1365.13