Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0448 ATGGGTGCCTCAGGAAAATGGGTAAAGGCATTAATCGGACTCAAGAAACCAGACAAAGACGACCATGTGAAGGAGGGTGGTGGTAAGAGCAAGAGGTGGAGGCTATGGAGGAGTTCTTCAGGGGACACGGGGGGTTCTTGGAAGGGTTTCAAAGGAGGAAACTACAGAGCAGCTTCTGAAGTGGGGTCTGATTCTTCTCCACCTGTTGTAGCAGCAGATGCAGATGCAGATGCTGCTTTCACAGCCGCTGTAGCCACTGTAGTTCGAGCTCCACCTAAGGATTTCAGACTCGTCAAGCAAGAATGGGCAGCTATAAGAATCCAAACTGCTTTCCGCGCCTTCTTGGCAAGAAGGGCTTTGAGGGCATTGAAGGGAGTGGTGAGGATTCAAGCGCTTGTTCGGGGGAGACAGGTGAGGAAGCAGGCTGCGGTGACATTGAGGTGCATGCAGGCCTTGGTTCGAGTTCAGGCCAGAGTAAGAGCTCGTCGTGTGAGGATGTCCATAGAGGGGCAAGCTGTGCAGAACTTGCTCAACGAGCGACGGAGTAAGCTTGATCTTTTGAAGCAAGCTGAGGAAGGATGGTGTGACAGCAGAGGAACGTTGGAAGATGTTAAGACAAAGATACAAATGAGGCAAGAAGGAGCTTTCAAAAGGGAAAGAGCAATGGCTTACTCTCTTGCTCACAAGCAATGCAGATCAACTCCAAGCTCTAATTCACGAACAAATGCCTCTTTTTCCTCTCTCAAGAGTCATGAGATGAACAAAGCTAACGGTGGGTGGAGTTGGTTGGAGCGTTGGATGGCAGCCAAGCCTTGGGAGAGTAGATTGATGGAACAATCACAATCTCAGGCTGAAGCCTTAGATAAAACCCCAACTCCAAAGAAGTTTGTGGAATCCTTTGTGAGCTCTAATTCCAAACCATGCACGGTCAAAGTCAAGAAAAACAACGTGACAACAAGGGTTTTTGCTAGGCCACCCCTGGTTGGGCAAGCTACACGCTCATCCTCAAGTCCAAGTTCCGAGTTTCGATACGATGAGAGTTCTGCATCATCCTCCATTTGTACATCTACAACACCAATGTCTGGGAACACTTGTGACAGGACTGAGGATAGTAATGGTAATGCTGTTGCTAGGCCTAATTACATGAACCTGACTCAGTCCACAAAGGCAAAGCAAAAGACAAGTAGTAATCATGTGTATAATAGAGCTCAGAGGCAGCAATCCATGGATGAGTTTCAATTTCTCAAGAGGGCAGCGGTTTTCTCCAATGGAGATTCCAAAAGCACGGCTGGTTCTGACCCTTCAATCAACTTTTCTAGGCCACTTCACTTGGACAAGAGTTCAGTTATGACACGTTGA 1359 0.4798 MGASGKWVKALIGLKKPDKDDHVKEGGGKSKRWRLWRSSSGDTGGSWKGFKGGNYRAASEVGSDSSPPVVAADADADAAFTAAVATVVRAPPKDFRLVKQEWAAIRIQTAFRAFLARRALRALKGVVRIQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQAVQNLLNERRSKLDLLKQAEEGWCDSRGTLEDVKTKIQMRQEGAFKRERAMAYSLAHKQCRSTPSSNSRTNASFSSLKSHEMNKANGGWSWLERWMAAKPWESRLMEQSQSQAEALDKTPTPKKFVESFVSSNSKPCTVKVKKNNVTTRVFARPPLVGQATRSSSSPSSEFRYDESSASSSICTSTTPMSGNTCDRTEDSNGNAVARPNYMNLTQSTKAKQKTSSNHVYNRAQRQQSMDEFQFLKRAAVFSNGDSKSTAGSDPSINFSRPLHLDKSSVMTR* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0448 452 MobiDBLite consensus disorder prediction 423 452 - -
Gso4g0448 452 MobiDBLite consensus disorder prediction 351 379 - -
Gso4g0448 452 ProSiteProfiles IQ motif profile. 100 128 IPR000048 GO:0005515
Gso4g0448 452 PANTHER IQ-DOMAIN 5-RELATED 1 451 - -
Gso4g0448 452 MobiDBLite consensus disorder prediction 18 45 - -
Gso4g0448 452 MobiDBLite consensus disorder prediction 18 36 - -
Gso4g0448 452 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 451 - -
Gso4g0448 452 Pfam IQ calmodulin-binding motif 124 141 IPR000048 GO:0005515
Gso4g0448 452 Pfam IQ calmodulin-binding motif 102 121 IPR000048 GO:0005515
Gso4g0448 452 Coils Coil 173 193 - -
Gso4g0448 452 Gene3D - 98 147 - -
Gso4g0448 452 ProSiteProfiles IQ motif profile. 124 151 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0448 Gso-Chr4 4232832 4235288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0448 1 442 IQD Protein Family AT2G26180 59.594 2.18e-146 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0448 - - gsj:114408830 784.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0448 4 4232832 4235288 Gso6g0429 6 3975205 3977761 GST
Gso14g0853 14 9497857 9501043 Gso4g0448 4 4232832 4235288 PCT
Gso17g1928 17 38379214 38382403 Gso4g0448 4 4232832 4235288 PCT
Gso4g0448 4 4232832 4235288 Gso14g0853 14 9497857 9501043 PCT
Gso4g0448 4 4232832 4235288 Gso17g1928 17 38379214 38382403 PCT