Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0447 ATGGTGGTGTTCATGGATTATTTGGAATGGTTGTTTGCAATTCCAAGTGTCCCTTCTGCTTCAGCAATGTTCACCCTGCTTGCTTTAATTGGAGGATTGTTGGTTTATCTGTATGCACCCTATTGGGGGTTAAGGAAGGTTCCAGGGCCACCATCTCTGCCCCTTGTAGGACACCTTCCCTTGCTGGCAAAGTATGGTCCTGATGTGTTCTCAGTCCTGGCCAAGCAATATGGTCCTATTTACAGATTCCATATGGGAAGACAGCCACTAATAATTATAGCAGATGCAGAGCTTTGTAAGGAGGCTGGAATAAAAAAATTCAAAGACATTTCAAACAGAAGTATTCCCTCACCAATTTCTGCTTCCCCTCTTCACCAAAAGGGCCTCTTCTTCAGCCGGGATTCACAATGGTCTACCATGCGAAACACTATATTATCAATGTACCAGCCATCATACTTGTCCAGATTAGTGCCAACAATGCAGTCCTTCATAGAATCTGCGACTCAAAACCTTGACTCTCAAAAAGAAGACATAATTTTCTCCAACCTGTCCCTAAGATTAGCAACTGATGTGATTGGACATGCAGCATTTGGTGTCAACTTTGGCCTTTCTAGGCCACATTCAGTTTGTGATTCCATCAAGAGTGTTAATGTTAACAATAACAATAACAATGCAAGTGCTAGTAGTAGTAGTAGTAGTAATGATAATGAAGTATCAGATTTCATCGACCAACACATATACTCCACAACACAGCTAAAGATGGACTTGTCTGGTTCCTTGTCCATTATCTTGGGTCTGCTTTTGCCAATACTTCAGGAGCCATTTAGGCAGATTCTGAAGAGAATTCCTGGCACCATGGACTGGAAGATTGAGCGTACCAACCAGAAACTAAGTGGCCGTCTTGATGAGATTGTGGAGAAGAGAATGAAAGACAAGGCACGAAGTTCGAAGGATTTCTTGTCACTCATACTTAATGCCAGAGAAACAAAAGCTGTTTCAGAGAATGTGTTCACACCTGACTACATAAGTGCTGTTACTTACGAGCACCTACTTGCTGGCTCCGCAACCACTTCCTTTACCTTGTCTTCTGTTGTCTATTTGGTTGCTGGACACCCTGAAGTTGAGAAAAAGTTGCTTCATGAGATTGATGGGTTTGGTCCAGTGGATCAGATACCCACTTCTCAAGATCTTCATAACAAGTTTCCTTATCTTGATCAGGTGATCAAAGAGGCCATGAGGTTTTACACTGTCTCTCCCTTAGTTGCAAGAGAAACATCAAATGAAGTAGAGATTGGAGGCTATCTCCTTCCAAAGGGGACTTGGGTCTGGTTAGCGCTTGGAGTTCCAGCAAAAGACCCCAAAAACTTTCCAGAGCCAGAAAAGTTCAAACCAGATAGGTTTGACCCCAACTGTGAAGAAATGAAACGAAGGCATCCTTATGCTTTTATACCATTTGGAATTGGTCCTCGGGCTTGCATTGGTAAACAATTTTCCCTACAAGAGATCAAGCTTTCTCTGATTCATTTATATCGAAAATACTTGTTTCGGCATTCTCCCAATATGGAAAACCCCTTAGAACTCCAGTATGGGATAGTCCTCAACTTCAAGCATGGGGTCAAGCTCAGAGTCATAAAAAGAACAGAGACTTGCTAA 1653 0.4235 MVVFMDYLEWLFAIPSVPSASAMFTLLALIGGLLVYLYAPYWGLRKVPGPPSLPLVGHLPLLAKYGPDVFSVLAKQYGPIYRFHMGRQPLIIIADAELCKEAGIKKFKDISNRSIPSPISASPLHQKGLFFSRDSQWSTMRNTILSMYQPSYLSRLVPTMQSFIESATQNLDSQKEDIIFSNLSLRLATDVIGHAAFGVNFGLSRPHSVCDSIKSVNVNNNNNNASASSSSSSNDNEVSDFIDQHIYSTTQLKMDLSGSLSIILGLLLPILQEPFRQILKRIPGTMDWKIERTNQKLSGRLDEIVEKRMKDKARSSKDFLSLILNARETKAVSENVFTPDYISAVTYEHLLAGSATTSFTLSSVVYLVAGHPEVEKKLLHEIDGFGPVDQIPTSQDLHNKFPYLDQVIKEAMRFYTVSPLVARETSNEVEIGGYLLPKGTWVWLALGVPAKDPKNFPEPEKFKPDRFDPNCEEMKRRHPYAFIPFGIGPRACIGKQFSLQEIKLSLIHLYRKYLFRHSPNMENPLELQYGIVLNFKHGVKLRVIKRTETC* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0447 550 Pfam Cytochrome P450 48 533 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g0447 550 PRINTS P450 superfamily signature 352 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g0447 550 PRINTS P450 superfamily signature 406 417 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g0447 550 PRINTS P450 superfamily signature 483 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g0447 550 PRINTS P450 superfamily signature 492 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g0447 550 SUPERFAMILY Cytochrome P450 40 546 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g0447 550 PANTHER CYTOCHROME P450 FAMILY PROTEIN 16 547 - -
Gso4g0447 550 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g0447 550 PRINTS E-class P450 group I signature 341 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g0447 550 PRINTS E-class P450 group I signature 361 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g0447 550 PRINTS E-class P450 group I signature 405 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g0447 550 PRINTS E-class P450 group I signature 445 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g0447 550 PRINTS E-class P450 group I signature 482 492 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g0447 550 PRINTS E-class P450 group I signature 492 515 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g0447 550 Gene3D Cytochrome P450 35 549 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g0447 550 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 485 494 IPR017972 GO:0005506|GO:0016705
Gso4g0447 550 PANTHER THROMBOXANE-A SYNTHASE 16 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0447 Gso-Chr4 4225486 4232437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0447 85 546 Cytochrome P450 AT2G26170 72.727 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0447 K20771 - gmx:100797803 1033.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0447 4 4225486 4232437 Gso6g0428 6 3965403 3975142 GST
Gso14g0852 14 9486321 9497758 Gso4g0447 4 4225486 4232437 PCT
Gso17g1929 17 38382413 38387985 Gso4g0447 4 4225486 4232437 PCT
Gso4g0447 4 4225486 4232437 Gso14g0852 14 9486321 9497758 PCT
Gso4g0447 4 4225486 4232437 Gso17g1929 17 38382413 38387985 PCT