Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0444 ATGAGCGCAGCGGATGATGATGACCCAGAAAGGAGAAGATTGAATAGTGGGTTGAAGAGCTTTCAGCGCGATCTGATGGCTGGGGCGGTGATGGGTGGTGTGGTGCACACGATTGTGGCCCCAATTGAGAGGGCGAAGCTATTGTTGCAGACCCAAGAGAGCAACTTGGCGATTGTGGCGAGTGGGCGTCGCAGATTCAAGGGCATGTTGGATTGCATAGCCCGTACGGTCAGGGAAGAAGGCATTCTCTCTTTGTGGAGAGGCAATGGCAGCAGTGTTATTCGTTACTATCCTTCTGTCGCTCTCAATTTCTCTCTCAAGGATCTATACAAAAGCATGTTAAGAGGTGGAAACTCTAGTGACAATCTTTTGCCAGGTGCCACTGCTAATTTTGCTGCGGGCGCTGCAGCCGGCTGTACAACGCTTGTGTTGGTATACCCCCTTGATATAGCACACACGCGCCTTGCTGCTGACATTGGAAGGACAGACGTGCGCCAATTTCGAGGCATTTACCATTTCTTGGCTACCATATTCCACAAGGATGGCATTTGGGGGATCTACCGGGGCCTTCCTGCATCTCTACATGGGATGGTGGTACACAGGGGCCTTTATTTTGGAGGCTTTGATACCATGAAAGAGATCATGTCTGAAGAATCAAAACCTGAGTTGGCGTTGTGGAAGCGTTGGGTGGTAGCTCAGGCAGTCACAACCTCTGCCGGGTTGATATCTTATCCACTAGACACGGTTCGTAGGAGGATGATGATGCAATCTGGCATGGAACAGCCAGTGTACAACAGCACCTTGGACTGCTGGAGGAAGATCTATAGGACAGAGGGGTTGGCTTCATTTTACCGTGGTGCAGTTTCTAATGTGTTTAGGAGCACAGGAGCAGCAGCTATCTTAGTCTTGTACGATGAGGTTAAGAAATTTATGAACTGGGGGAAAATTTAA 951 0.4953 MSAADDDDPERRRLNSGLKSFQRDLMAGAVMGGVVHTIVAPIERAKLLLQTQESNLAIVASGRRRFKGMLDCIARTVREEGILSLWRGNGSSVIRYYPSVALNFSLKDLYKSMLRGGNSSDNLLPGATANFAAGAAAGCTTLVLVYPLDIAHTRLAADIGRTDVRQFRGIYHFLATIFHKDGIWGIYRGLPASLHGMVVHRGLYFGGFDTMKEIMSEESKPELALWKRWVVAQAVTTSAGLISYPLDTVRRRMMMQSGMEQPVYNSTLDCWRKIYRTEGLASFYRGAVSNVFRSTGAAAILVLYDEVKKFMNWGKI* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0444 316 Gene3D Mitochondrial carrier domain 23 313 IPR023395 -
Gso4g0444 316 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 16 315 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gso4g0444 316 PRINTS Mitochondrial carrier protein signature 24 37 IPR002067 GO:0055085
Gso4g0444 316 PRINTS Mitochondrial carrier protein signature 37 51 IPR002067 GO:0055085
Gso4g0444 316 PRINTS Mitochondrial carrier protein signature 88 108 IPR002067 GO:0055085
Gso4g0444 316 PRINTS Mitochondrial carrier protein signature 140 158 IPR002067 GO:0055085
Gso4g0444 316 PRINTS Mitochondrial carrier protein signature 187 205 IPR002067 GO:0055085
Gso4g0444 316 PRINTS Mitochondrial carrier protein signature 232 254 IPR002067 GO:0055085
Gso4g0444 316 ProSiteProfiles Solute carrier (Solcar) repeat profile. 125 214 IPR018108 -
Gso4g0444 316 Pfam Mitochondrial carrier protein 224 312 IPR018108 -
Gso4g0444 316 Pfam Mitochondrial carrier protein 20 115 IPR018108 -
Gso4g0444 316 Pfam Mitochondrial carrier protein 127 217 IPR018108 -
Gso4g0444 316 PRINTS Adenine nucleotide translocator signature 21 33 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gso4g0444 316 PRINTS Adenine nucleotide translocator signature 66 87 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gso4g0444 316 PRINTS Adenine nucleotide translocator signature 99 111 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gso4g0444 316 PRINTS Adenine nucleotide translocator signature 125 138 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gso4g0444 316 PRINTS Adenine nucleotide translocator signature 228 244 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gso4g0444 316 ProSiteProfiles Solute carrier (Solcar) repeat profile. 19 113 IPR018108 -
Gso4g0444 316 SUPERFAMILY Mitochondrial carrier 19 306 IPR023395 -
Gso4g0444 316 PANTHER ADP,ATP CARRIER PROTEIN-RELATED 16 315 - -
Gso4g0444 316 ProSiteProfiles Solute carrier (Solcar) repeat profile. 227 310 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0444 Gso-Chr4 4189830 4194692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0444 21 313 Antiporters AT5G17400 39.535 4.95e-66 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0444 K05863 - gmx:100797251 617.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0444 4 4189830 4194692 Gso6g0426 6 3939094 3944388 GST