Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0438 ATGGGAATAGCAAGGAAATGTTCATATTGTGGTAACTTAGGCCACAATGCAAGGACTTGTAAAAGCACTCTCAGTCAAGGACAACTAAAGCTCTTCGGAGTGCAACTAGATGTTTCTTCTTTTTCTTCATCCTCAAATTCTTTTTCATCATCACCTTCATATTCTGCCATGAAAAGAAGTTTCAGCACGAATTACTTGTTGTCTTCATGGCCCTCTTCCTCTGTACCCTCCTCCTTTTCCTCGCCTTCCCTACTTGGTGCAAATGAAAATTTAGATGGTTACTTGCTCAATGCAAATAGCCTCATATCAACAATTCAAGACGCAAAAAAAGGTGTCCCGTGGACAGAGGAGGAGCATCAGATATTTCTTATAGGGCTTGAGAAGCTGGGTAAGGGGAACTGGAGAGGCATATCTAGAAGTTTTGTGACAACAAGAACACCCACCCAAGTGGCTAGTCATGCACAAAAATATTATCTCCGTCAATCACAGAATAGCTTCAATAAAAGAAAGCACCGTCCCAGCCTGTTAGATAATTGGCTTTCTCTTCGTCCTCATTCAGTGCTGAATTGGGCTACCACTTCAACTTCAACTAATTGCACTGTTCAGAGAGCGAACCCAGATTTAGACCTCAAACTTGCAACTCCCACGCCATTTGAGCTACCAGTAGCAGATACATAG 678 0.4233 MGIARKCSYCGNLGHNARTCKSTLSQGQLKLFGVQLDVSSFSSSSNSFSSSPSYSAMKRSFSTNYLLSSWPSSSVPSSFSSPSLLGANENLDGYLLNANSLISTIQDAKKGVPWTEEEHQIFLIGLEKLGKGNWRGISRSFVTTRTPTQVASHAQKYYLRQSQNSFNKRKHRPSLLDNWLSLRPHSVLNWATTSTSTNCTVQRANPDLDLKLATPTPFELPVADT* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0438 225 SUPERFAMILY Homeodomain-like 108 162 IPR009057 -
Gso4g0438 225 Pfam Myb-like DNA-binding domain 113 157 IPR001005 -
Gso4g0438 225 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 4 178 - -
Gso4g0438 225 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 106 162 IPR017930 -
Gso4g0438 225 PANTHER TRANSCRIPTION FACTOR KUA1 4 178 - -
Gso4g0438 225 SMART sant 110 160 IPR001005 -
Gso4g0438 225 ProSiteProfiles Myb-like domain profile. 106 158 IPR001005 -
Gso4g0438 225 ProSiteProfiles Zinc finger CCHC-type profile. 5 22 IPR001878 GO:0003676|GO:0008270
Gso4g0438 225 Gene3D - 112 163 - -
Gso4g0438 225 CDD SANT 113 157 IPR001005 -
Gso4g0438 225 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 109 161 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0438 Gso-Chr4 4138085 4140082 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gso4g0438 Myb_DNA-binding 4.5e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0438 - - gmx:100795143 417.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0438 4 4138085 4140082 Gso6g0420 6 3892012 3893728 GST