Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0391 ATGCGGGTTGTTTGTTGTTCCAATTCAGGCGTGAGTGCTTTCCCTAGTTGTCTTAGATTCCCTCCACTGATCGCAATTTCAACAACACCCTCTTCGATCCGCTTTCTAAATTCTCCACCCCTCCGTTCCACTGCTTCGTCGCAACACGTTACAATAATGGCTTCGAAGAATTCTCAACAAGACACGCGCTTAGCGAGAATCGCCTCTGCAATCCGAGTCATCCCCGACTTTCCTAAGCCAGGAATTTTGTTTCAGGACATAACCACGCTGCTTCTTGATACAAAGGCTTTCAAAGACACCATTGACTTGTTTGTTGAGAGGTACAGAGATCAAAACATCAATGTTGTCGCAGGAGTTGAAGCTAGAGGCTTTATATTTGGTCCACCCATTGCATTAGCTATTGGAGCAAAATTTGTCCCCATGAGGAAACCCAATAAATTGCCTGGGGAGGTTATCTCAGAAGAGTATTCTTTGGAGTATGGAACAGACAAAATGGAGATGCATGTAGGGGCTGTACAACCTGGAGAACGAGCCTTAATCATAGATGATCTTATTGCCACTGGGGGAACGTTAGGTGCTGCAATTAAGCTTCTAGAACGTGTTGGGGTGCATGTTGTGGAGTGTGCTTGTGTGATTGAATTGCCAGAGTTAAAGGGGCGGGAAAGGTTGGGAGACAAGTCGCTATTTGTCTTGATTAATGGGGGAGCCTGA 711 0.4571 MRVVCCSNSGVSAFPSCLRFPPLIAISTTPSSIRFLNSPPLRSTASSQHVTIMASKNSQQDTRLARIASAIRVIPDFPKPGILFQDITTLLLDTKAFKDTIDLFVERYRDQNINVVAGVEARGFIFGPPIALAIGAKFVPMRKPNKLPGEVISEEYSLEYGTDKMEMHVGAVQPGERALIIDDLIATGGTLGAAIKLLERVGVHVVECACVIELPELKGRERLGDKSLFVLINGGA* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0391 236 CDD PRTases_typeI 101 232 IPR000836 -
Gso4g0391 236 Pfam Phosphoribosyl transferase domain 93 230 IPR000836 -
Gso4g0391 236 SUPERFAMILY PRTase-like 69 228 IPR029057 -
Gso4g0391 236 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 55 233 - -
Gso4g0391 236 Gene3D - 53 233 IPR029057 -
Gso4g0391 236 Hamap Adenine phosphoribosyltransferase [apt]. 67 234 IPR005764 GO:0003999|GO:0005737|GO:0006168
Gso4g0391 236 TIGRFAM apt: adenine phosphoribosyltransferase 68 232 IPR005764 GO:0003999|GO:0005737|GO:0006168
Gso4g0391 236 PANTHER ADENINE PHOSPHORIBOSYL TRANSFERASE, PHOSPHORIBOSYLTRANSFERASE-LIKE PROTEIN-RELATED 55 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0391 Gso-Chr4 3567773 3572376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0391 53 236 PRT Gene Family AT1G27450 80.978 1.09e-108 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0391 K00759 - gmx:100305792 462.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0391 4 3567773 3572376 Gso4g0391 4 3567773 3572376 ECH
Gso4g0391 4 3567773 3572376 Gso6g0368 6 3454809 3459568 GST