Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0377 ATGGAGACTCGTGCCGCCGCAAAGAGAAAGGCAAACGCCGCCATCGTAGTGGTTGTCGAAAAACAACACCCCAAAAGACAGCGGGTTGTGTTGGGTGAACTTCCCAATTTGCAAAACCTTATTGTCTCCAAAATTCAAAATCCGCGCAAAGAAAAACTCCAATGTCGGAAGAATCCCAATGCGAATAAACCATCACCCACAAACAACACCCTTTCTTCCCCTCAGCTCGACGGATCTTATGTTTCGGACATCCACGAGTATCTTCGTGAAATGGAGATGCAGAAAAAGAGAAGACCAATGGTTAACTACATTGAGAAATTTCAGAAAATAGTTACACCAACCATGAGAGGAATATTGGTGGATTGGTTAGTGGAGGTTGCTGAGGAGTACAAGCTTCTCTCGGATACTCTTCATCTCTCTGTTTCATACATCGATAGGTTTTTATCAGTTAATCCAGTCACTAAATCAAGACTTCAGTTACTGGGTGTTTCGTCCATGCTCATCGCTGCAAAATATGAGGAAACGGACCCACCAAGTGTGGACGAGTTTTGCAGCATCACTGATAACACGTATGACAAGGCAGAGGTTGTGAAGATGGAAGCTGACATACTCAAGTCCCTAAAGTTTGAAATGGGAAATCCTACTGTAAGCACCTTTCTAAGGAGGTATGCTAATGTTGCTTCTGATGTCCAAAAAACTCCAAATTCGCAGATTGAACATTTGGGCAGCTATATTGGTGAGCTAAGTTTGTTGGACTACGATTGTTTAAGATTCTTGCCTTCTATTGTGGCTGCCTCGGTTATATTTCTTGCCAAGTTCATTATCTGGCCTGAAGTGCATCCTTGGACTTCTTCCTTGTGTGAATGCTCGGGTTACAAGCCAGCTGAATTGAAAGAATGTGTCCTTATCCTGCATGACTTGTATTTGTCAAGAAAGGCAGCGTCCTTCAAAGCTGTTCGGGAGAAATACAAGCATCAAAAGTTCAAATGTGTGGCAAACCTGCCTACCCCTCCATATGTACCGAGTTGTTACTTTGAAGACCAGTGA 1047 0.4327 METRAAAKRKANAAIVVVVEKQHPKRQRVVLGELPNLQNLIVSKIQNPRKEKLQCRKNPNANKPSPTNNTLSSPQLDGSYVSDIHEYLREMEMQKKRRPMVNYIEKFQKIVTPTMRGILVDWLVEVAEEYKLLSDTLHLSVSYIDRFLSVNPVTKSRLQLLGVSSMLIAAKYEETDPPSVDEFCSITDNTYDKAEVVKMEADILKSLKFEMGNPTVSTFLRRYANVASDVQKTPNSQIEHLGSYIGELSLLDYDCLRFLPSIVAASVIFLAKFIIWPEVHPWTSSLCECSGYKPAELKECVLILHDLYLSRKAASFKAVREKYKHQKFKCVANLPTPPYVPSCYFEDQ* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0377 348 CDD CYCLIN 115 204 IPR013763 -
Gso4g0377 348 Gene3D - 83 333 - -
Gso4g0377 348 SUPERFAMILY Cyclin-like 73 211 IPR036915 -
Gso4g0377 348 CDD CYCLIN 214 305 IPR013763 -
Gso4g0377 348 PIRSF Cyclin_A_B_D_E 2 342 IPR039361 -
Gso4g0377 348 MobiDBLite consensus disorder prediction 58 78 - -
Gso4g0377 348 SMART cyclin_7 121 205 IPR013763 -
Gso4g0377 348 SMART cyclin_7 218 306 IPR013763 -
Gso4g0377 348 PANTHER CYCLIN-A3-1-RELATED 21 347 - -
Gso4g0377 348 Pfam Cyclin, N-terminal domain 83 211 IPR006671 -
Gso4g0377 348 SMART Cyclin_C_2 214 337 IPR004367 -
Gso4g0377 348 SUPERFAMILY Cyclin-like 214 339 IPR036915 -
Gso4g0377 348 Pfam Cyclin, C-terminal domain 214 336 IPR004367 -
Gso4g0377 348 ProSitePatterns Cyclins signature. 116 147 IPR006671 -
Gso4g0377 348 PANTHER CYCLINS 21 347 IPR039361 -
Gso4g0377 348 Gene3D - 97 212 - -
Gso4g0377 348 MobiDBLite consensus disorder prediction 48 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0377 Gso-Chr4 3460142 3462435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0377 3 347 Core Cell Cycle Gene Families AT5G43080 56.374 2.57e-135 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0377 K06627 - gmx:547779 693.345