Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0370 ATGCGCATGGTTCTACTCTTCCTCCTTCTCCTCTTCGTCCCAACCTCCTTTGGGACAATAGAAAGACTCCCAGAAGGTTCCTCACTTTCCGTTGAGAAACAAAACGACACCATCGTTTCATCCAACGGCGATTTCTCAGCTGGATTCTTCCAAGTCGGCGACAACGCCTTCTGCTTCTCGGTATGGTTCACAAGGTCCGAACGACCCACCGTTTTATGGATGGCCAACCGCGACAAGCCCGTCAACGGCAGAGGCTCACACCTCTCCCTCTGGAAAGACGGTAACGTCGTTTTGACCGACGCAGGCGGAACCATCATCTGGGCAACCGCCACCCTCTCCTCCTCACAACAACTACACCTAAAGCTAAGAAACAACGGAAACCTCGTTCTCCTCGCTTCCAAATCCACCAATACCACCATCATTTGGCAAAGCTTCGATTCCCCAACGGACACCCTTCTTACTCTCCAACCACTCACGGAGCAAGCGAGCCTCGTTTCCTCGAGAAGCACAACGAACCATTCCTCGGGATTCTACAAACTCTACTTCGACAACGACAACGTTCTTCGCTTACTCTACAAGGGTCCCACGTTGTCCAGCGTGTACTTTCCAGAGCCGTGGAGGCTTCCAATGGATATAGGCAGATCCACCTACAATGTTACCAAAACCGCGGTCTTAGATTCCTTTGGACGATTCACTTCCTCTGATGGCTTCCAATTCCGCTCCACCGATCATCCCAAAAAACTGTTTCGAAGACTCACCATGGATCCTGACGGTAACTTGCGTTTGTATAGCTTCGACGAGAAGCTTAAGACGTGGCAGGTGACGTGGCAGCTTATTCCCCAACCGTGTACCGTTCATGGCATTTGCGGAGCTAACAGCGCGTGCAATTACGATCGTGTTGTCGGAAGGACCTGCTATTGTTTAAAAGGGTTTAAGGTTAAGGATCCTAATGATTGGACTCAGGGGTGTGAGCCCGAGTTCGATCCTTCTGTTTTTTCTTGCAACAGTGGCGAGTCTATGGGTTTTCTCCATTATCCAACCACGGAGTTGTACGGCTATGACTGGAACATAACAGTGGTTAATAGCTTGGAGGAATGCCTGAATCTATGCCTGGAACTTTGTGATAAGTGCGTAGCTGTTCAATTCAAGTTCAACGATGTTGCTAAGTATAATTGTTACCCCAAAACGATGGTATTCAATGGAAGGTATACTCCTAATTTCGACGGAGAGATGTATCTGAAGTTGCCGCAAGCGATTTTGGGCTCATCTGCCACGCCTCTTAATAAGCATTCAACGATGAATTGTACCGCTGGTTTGTCTCAACAGTTGGAGAGGTTTTACGAAGCGCCTAGTAGAAACTCCACGTTGAGTTTCTTGGTTTGGTTCGCTTGCGGGATGGGGGTGTTTGAGTTGTCCACCATTTTCCTGGTGTGGTTCTTCTTGTTCAGAACCAGCAAGAACTCTGAGACGGTGGATCAACAACGGCACCTTCTTTCCGCCACTGGGTTTCAGAGGTTCACCTACGCAGAGCTCAAAAGCGCAACAAAAGGGTTCAAAGAAGAAATTGGACGAGGAGCGGGTGGGGTTGTTTACAAAGGAGTACTCTATGATGACCGTGTTGCGGCTATTAAACGCTTAGGAGAAGCTACACAAGGAGAAGCTGAGTTTTTGGCGGAGATAAGCACAATAGGCATGTTGAACCACATGAATTTGATTGACATGTGGGGGTACTGCGTTGAAGGGAAGCATAGGATGTTGGTGTATGAGTACATGGAACATGGGTCCTTAGCGGGCAATCTTTTTTCTAATACCCTTGATTGGAAGAAGAGGTTTAACGTTGCTGTGGGTACAGCGAAAGGTTTGGCTTATTTGCACGAAGAGTGTTTGGAGTGGATTTTGCATTGCGATGTGAAGCCTCAAAACATTCTCCTTGACTCGGATTTCCAACCCAAGGTGGCGGATTTCGGTTTGTCAAAACTTTTAAACAGAGACGAGCGTGGGAATTCTACTTTCTCAAGAATAAGAGGGACACGAGGTTACATGGCTCCGGAGTGGGTTTACAATCTGCCCATAACTTCCAAGGTGGATGTTTATAGTTATGGGATTGTGGTGTTGGAAATGGTGACTGGAAGGAGCCCTATGGAAATTCACAGCCTTGAGAACAGTAGGGGCATAGAGCAGCGACGGTTGGTGATGTGGGTAACGGACAAGATAAACGATGCACCCACGAGTGGGTTTTGGATTGAGGAGATACTTGATCCCAACTTGGAAGGCCAATGCCAAGTTTCGCAAGTTGAGGTTTTGGTTAAGGTGGCTTTGCAGTGTGTGCAAGATGACATGAATCAAAGACCCTCCATGAGCCAAGTAGTGGAGATGCTTCTGTCCCATGAAAATAATGTGCTCCCTCGTTAA 2412 0.4789 MRMVLLFLLLLFVPTSFGTIERLPEGSSLSVEKQNDTIVSSNGDFSAGFFQVGDNAFCFSVWFTRSERPTVLWMANRDKPVNGRGSHLSLWKDGNVVLTDAGGTIIWATATLSSSQQLHLKLRNNGNLVLLASKSTNTTIIWQSFDSPTDTLLTLQPLTEQASLVSSRSTTNHSSGFYKLYFDNDNVLRLLYKGPTLSSVYFPEPWRLPMDIGRSTYNVTKTAVLDSFGRFTSSDGFQFRSTDHPKKLFRRLTMDPDGNLRLYSFDEKLKTWQVTWQLIPQPCTVHGICGANSACNYDRVVGRTCYCLKGFKVKDPNDWTQGCEPEFDPSVFSCNSGESMGFLHYPTTELYGYDWNITVVNSLEECLNLCLELCDKCVAVQFKFNDVAKYNCYPKTMVFNGRYTPNFDGEMYLKLPQAILGSSATPLNKHSTMNCTAGLSQQLERFYEAPSRNSTLSFLVWFACGMGVFELSTIFLVWFFLFRTSKNSETVDQQRHLLSATGFQRFTYAELKSATKGFKEEIGRGAGGVVYKGVLYDDRVAAIKRLGEATQGEAEFLAEISTIGMLNHMNLIDMWGYCVEGKHRMLVYEYMEHGSLAGNLFSNTLDWKKRFNVAVGTAKGLAYLHEECLEWILHCDVKPQNILLDSDFQPKVADFGLSKLLNRDERGNSTFSRIRGTRGYMAPEWVYNLPITSKVDVYSYGIVVLEMVTGRSPMEIHSLENSRGIEQRRLVMWVTDKINDAPTSGFWIEEILDPNLEGQCQVSQVEVLVKVALQCVQDDMNQRPSMSQVVEMLLSHENNVLPR* 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0370 803 ProSitePatterns Serine/Threonine protein kinases active-site signature. 632 644 IPR008271 GO:0004672|GO:0006468
Gso4g0370 803 Pfam Protein kinase domain 519 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g0370 803 Gene3D Phosphorylase Kinase; domain 1 481 590 - -
Gso4g0370 803 Pfam D-mannose binding lectin 70 158 IPR001480 -
Gso4g0370 803 ProSitePatterns Protein kinases ATP-binding region signature. 522 544 IPR017441 GO:0005524
Gso4g0370 803 SUPERFAMILY Protein kinase-like (PK-like) 493 794 IPR011009 -
Gso4g0370 803 Pfam S-locus glycoprotein domain 237 314 IPR000858 GO:0048544
Gso4g0370 803 SMART serkin_6 516 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g0370 803 CDD B_lectin 33 148 IPR001480 -
Gso4g0370 803 SMART blect_4 29 148 IPR001480 -
Gso4g0370 803 SUPERFAMILY alpha-D-mannose-specific plant lectins 57 195 IPR036426 -
Gso4g0370 803 CDD STKc_IRAK 522 793 - -
Gso4g0370 803 CDD PAN_AP_plant 333 416 - -
Gso4g0370 803 Gene3D Transferase(Phosphotransferase) domain 1 591 801 - -
Gso4g0370 803 PANTHER OS07G0415500 PROTEIN 4 799 - -
Gso4g0370 803 ProSiteProfiles PAN/Apple domain profile. 334 416 IPR003609 -
Gso4g0370 803 Gene3D - 19 147 IPR036426 -
Gso4g0370 803 ProSiteProfiles Bulb-type lectin domain profile. 23 143 IPR001480 -
Gso4g0370 803 ProSiteProfiles Protein kinase domain profile. 516 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g0370 803 PANTHER RECEPTOR PROTEIN KINASE ZMPK1-RELATED 4 799 - -
Gso4g0370 803 PIRSF SRK 1 803 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0370 Gso-Chr4 3396152 3398783 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0370 447 794 Receptor kinase-like Gene Family AT3G58690 36.729 1.68e-65 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gso4g0370 Pkinase 5.9e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0370 - - gmx:100816469 1629.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0370 4 3396152 3398783 Gso4g0370 4 3396152 3398783 ECH
Gso4g0370 4 3396152 3398783 Gso6g0349 6 3290237 3292714 GST