Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0364 ATGGAAAGTGGATTACCTTTGCTTAATTGTCTCTTGCAGCAGACTCTCAGAACCATTTGCACTTCTCCTAATTCTTCCACTCCTTCCAAGTGGGTATATGCTGTCTTCTGGAGGATATTACCTCGAAACTTTCCTCCACCGAGGTGGGAATTAGGAGGAACTGCTCTTGATCTCTCCAAAGGAAATAAAAGGAACTGGATCCTTGTCTGGGAAGATGGGTTCTGCGATTTTAACGAATGCGAGCAAAGGAAGAGTGGTAGTGGTTACTTGAACGGTAGATTTGGAGCTGAGTTATTCTTCAAGATGTCGCATGAGGTTTACAATTATGGAGAGGGACTCGTGGGGAAAGTTGCCGCAGATAATAGTCACAAATGGGTTTACAATGAGAGTCACAACGAGTGTGAGTCTAGCTATGTTGCTTCATGGAATGCTTCAGTCGAACCTCAACCAAAGGCGTGGGAGTTTCAGTTCAATTCAGGCATTCAGAGTATAGTCATAATCGCCGTCAGAGAAGGCGTAGTGCAATTGGGTTCTTTCAACAAGATAGCAGAGGACCTGAATCTGGTGATCAGCATACAAAGGCAATTCAGCTACCTTCAAAGCATACCTGGTGTGTTTGGTATTCAAAGACCATACTTACGACTCCAACACCCATACATTGTGAAGCCTAGTTTCATAGCAAGCAATGCAATGCCTCTATATGATATGGGGTGGAACACCCCACAGAATGGAGCACCAGGCCCATCTCTTTGTTCAGGGACACAAAGCATCATTGAGAGAGTGAAGATTGAAGATTGTGAATTTCATCCCACCCATGATGATGATCACAAAGTAAAGTCACTCGTGATGGATGATCCTATGATGGTGAAGGAAGGATGGGGTTGGAGATTAGAATACCGTGGTGGGGATGGATGA 915 0.4448 MESGLPLLNCLLQQTLRTICTSPNSSTPSKWVYAVFWRILPRNFPPPRWELGGTALDLSKGNKRNWILVWEDGFCDFNECEQRKSGSGYLNGRFGAELFFKMSHEVYNYGEGLVGKVAADNSHKWVYNESHNECESSYVASWNASVEPQPKAWEFQFNSGIQSIVIIAVREGVVQLGSFNKIAEDLNLVISIQRQFSYLQSIPGVFGIQRPYLRLQHPYIVKPSFIASNAMPLYDMGWNTPQNGAPGPSLCSGTQSIIERVKIEDCEFHPTHDDDHKVKSLVMDDPMMVKEGWGWRLEYRGGDG* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0364 304 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 12 196 IPR025610 -
Gso4g0364 304 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 230 - -
Gso4g0364 304 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0364 Gso-Chr4 3313391 3316002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0364 13 200 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 30.688 2.47e-17 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0364 - - gmx:100817704 638.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0364 4 3313391 3316002 Gso4g0364 4 3313391 3316002 ECH
Gso4g0364 4 3313391 3316002 Gso6g0344 6 3234392 3236598 GST