Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0362 ATGCCGATTCATCCGCACTTATTACTCTTGCTACTACTGCTGCTTGCGTCCTCAAACGCCCACTGCTCCAAACTCCCCACCTTAGTTTTCACCGACGCAACCGCTCTCCTCGCCTTCAAACTAAAAGCCGACGTCAACGACCACCTTCACTTCTCCCCCCTCACGCGCGGCCTCCGCTTCTGCGCGTGGCAAGGCGTGGAATGCAACGGCCCCAAAGTGGTCCGTCTCGTTCTCCAAAACTTAGATCTCGGAGGCGCGTGGGCTCCCAACACACTCTCGCGTCTCGACCAGCTCCGCGTCCTCAGCTTGCAGAACAACTCACTCACCGGACCCTTACCTGACCTCACCGGTCTCTTCAATCTCAAAAGCCTCTTCCTCGATAACAACTACTTCACCGGTTCTCTCCCTCCCTCACTCTTCTCTCTCCACCGTCTCCGAAACTTGGATTTCTCCCACAACAACTTCTCCGGACCTATCTCCGCCGCGTTCACCTCCCTAGACCGCCTCCACAGCCTCCGTTTAAGCTTCAACTCTTTTAACGGTTCAATCCCTCCGTTTAACCAGTCCTCCCTAAAAGTCTTCGAAGTCTCCGGCAACAACCTCTCCGGCGCGGTTCCAGTGACTCCGACCCTGTTCCGTTTTCCGCCTTCCTCCTTCGCCTTCAACCCTAGCCTCTGCGGCGAAATCATCCGCGTGCAATGCCGTCCCGCACAGCCTTTCTTCGGACCCGCGGCGCCGCCCACGGCGGCGCTCGGCCAGAGCGCGCAGGTGCACGGCGTCAACGGCATAATCCGGCAGCCGTACGAGAAGAAGCGCCACGACCGGAGGGCGCTGATTATTGGCTTCTCGGCCGGAATATTCGTTCTGGTTTGCTCGCTGGTGTGCTTCGCGGCGGCGGTGAGGAAGCAGAGGAGCCGGAGCAAGAAGGACGGGAGGTCGGGGATTATGGCGGCGGATGAGGCGGCGACGGCGGAGGCTGCGGCGGTGATGCGGATGGAGATGGAGAGGGAGCTGGAGGAGAAAGTAAAGAGAGCGGAGGTGGCGAAGAGTGGGAGTTTAGTATTCTGTGCGGGTGAGGCGCAGGTGTATACGCTGGACCAGCTCATGAAGGGTTCAGCTGAACTTTTAGGGAGAGGGTGTTTGGGAACCACTTATAAGGCGGTTCTTGATAGCCGTCTGATGGTGACGGTGAAGCGCCTTGATGCGGGGAAAATGGCTTCGCATGCAACTAAGGAAGTGTTCGAGCGACACATGGAATCCGTTGGTGGCCTTCGACACCCCAATTTGGTTCCTCTTAGGGCTTATTTCCAGGCCAAGCACGAGAGGCTCATAATCTACGACTTTCAGCCCAATGGCAGCCTCTTCTCCCTCATACACGGTTCGAGATCAAGCAGGGCAAGGCCATTGCATTGGACATCGTGCTTAAAAATAGCAGAGGACGTAGCACAAGGTCTGGCCTTCATCCACCAGGCATGGAGACTGGTCCATGGCAATCTCAAGTCCTCCAATGTTCTCCTTGGACCAGATTTTGAGGCATGCATTACAGATTACTGCCTTTCTGTGTTGACACACCCATCCATATTTGATGAAGATGGGGATTCAGCAGCATACAGAGCTCCGGAGACTCGCAACCCCAATCATCACCCAACCCACAAATCCGATGTTTATGCGTATGGGATTTTGTTGCTTGAGCTTCTGACGGGGAAATTTCCCTCCGAGCTCCCATTCATGGTTCCTGGTGACATGTCAAGTTGGGTGAGGTCCATCAGGGATGACAATGGGAGCGAAGATAACCAAATGGACATGCTTCTTCAGGTGGCTACAACTTGTAGCTTGACCTCACCGGAGCAGAGGCCAACTATGTGGCAGGTCTTGAAGATGTTGCAGGAAATCAAAGAGATTGTACTATTGGAGGATAGTAGTGAATTGGACATACGCAGTAGTAATGCCATGCCTTAG 1959 0.5498 MPIHPHLLLLLLLLLASSNAHCSKLPTLVFTDATALLAFKLKADVNDHLHFSPLTRGLRFCAWQGVECNGPKVVRLVLQNLDLGGAWAPNTLSRLDQLRVLSLQNNSLTGPLPDLTGLFNLKSLFLDNNYFTGSLPPSLFSLHRLRNLDFSHNNFSGPISAAFTSLDRLHSLRLSFNSFNGSIPPFNQSSLKVFEVSGNNLSGAVPVTPTLFRFPPSSFAFNPSLCGEIIRVQCRPAQPFFGPAAPPTAALGQSAQVHGVNGIIRQPYEKKRHDRRALIIGFSAGIFVLVCSLVCFAAAVRKQRSRSKKDGRSGIMAADEAATAEAAAVMRMEMERELEEKVKRAEVAKSGSLVFCAGEAQVYTLDQLMKGSAELLGRGCLGTTYKAVLDSRLMVTVKRLDAGKMASHATKEVFERHMESVGGLRHPNLVPLRAYFQAKHERLIIYDFQPNGSLFSLIHGSRSSRARPLHWTSCLKIAEDVAQGLAFIHQAWRLVHGNLKSSNVLLGPDFEACITDYCLSVLTHPSIFDEDGDSAAYRAPETRNPNHHPTHKSDVYAYGILLLELLTGKFPSELPFMVPGDMSSWVRSIRDDNGSEDNQMDMLLQVATTCSLTSPEQRPTMWQVLKMLQEIKEIVLLEDSSELDIRSSNAMP* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0362 652 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 6 640 - -
Gso4g0362 652 Gene3D Ribonuclease Inhibitor 31 142 IPR032675 -
Gso4g0362 652 SUPERFAMILY Protein kinase-like (PK-like) 374 632 IPR011009 -
Gso4g0362 652 Pfam Protein kinase domain 374 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g0362 652 ProSiteProfiles Protein kinase domain profile. 370 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g0362 652 Gene3D Phosphorylase Kinase; domain 1 332 448 - -
Gso4g0362 652 Gene3D Ribonuclease Inhibitor 143 227 IPR032675 -
Gso4g0362 652 SUPERFAMILY L domain-like 30 207 - -
Gso4g0362 652 Pfam Leucine rich repeat 120 178 IPR001611 GO:0005515
Gso4g0362 652 Gene3D Transferase(Phosphotransferase) domain 1 450 644 - -
Gso4g0362 652 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 6 640 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0362 Gso-Chr4 3298409 3301978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0362 1 650 Receptor kinase-like Gene Family AT5G43020 55.672 0.0 689
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso4g0362 Pkinase 9.6e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0362 - - gmx:100817172 1260.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0362 4 3298409 3301978 Gso4g0362 4 3298409 3301978 ECH
Gso4g0362 4 3298409 3301978 Gso6g0343 6 3219778 3222940 GST