Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0356 ATGACTACTACCCCTGTTGTTCAACGCATTTCAGAATGCTTCGTCAAACCACATGGTTTAACCCAAGTGTCAAACCAAATATGTCATTTAACACAATGGGATATTGTTATGTTGTCTATGCACTATATCCAGAAGGGTCTACTCTTCAAGAAACCCACACCTCTTGTTGATCAACATGATTTCATAGAGAATCTCTTGGAGAAGCTCAAACACTCTCTTTCTCTCACTCTCTCCCATTTCTATCCTTTGGCTGGCCGATTTGTCACCCACAAAACACAAGACCCTCCTTCTTATGCTGTTTCTGTTGATTCCAAAAACAGTGATGGAGCCAGATTCATCTATGCAACTCTGGATATGACCATATCTGACATCCTCTCTCCCGTTGACGTCCCACTCGTTGTTCAGTCATTGTTTGACCACCACAAAGCAGTCAACCATGATGGTCACTCCATGCCCCTGTTGTCCATCCAAGTCACTGAACTAGTTGATGGTGTTTTCTTAGGTTGTTCCATGAACCACGCTGTCGGTGATGGCACCTCTTATTGGAATTTCTTCAATACATGGTCTCAGATCTTTCAATCTCAAGCTAAAGGGCACGAAACTGATGTTCCCATTTCACACCAACCTATTCTCAGCCGCTGGTTTCCGAATGATTGTGCTCCACCAATAAATCTTCCTTTCAAACATCATGACGAGTTTATCAGCAGATTTGAAGCACCCTTGATGAGGGAGAGAGTCTTCCACTTCTCAGCAGAGTCTATTGCAAAACTGAAAGCAAAGGCCAACATGGAATCCGATACCACAAAAATCTCTTCATTCCAGTCACTATCAGCACTTGTTTGGAGATCCATAACTCGTGCATGCTCCCTACCATATGAGCAAAGAACAAGTTGCAGGTTAACCGCAAACAATCGAACAAGAATGGAACCACCTCTGCCTCAGGAATACTTTGGAAACTCAGTGAGTAGGGTGAGTGCAGAAACAACAGTAGGGGAATTACTTGAGAACAATCTAGGATGGGCTGCATGGAAGTTGCACCTGGCTGTTACAAACCATAACGACAGAGTAGTTCTGCAATCACTCAAAGAGTGGTTACAGTCTCCTTTAATCTATCAACTTGGTCAGCCCATGGACCCGTACGTTGTGTTGATAAGTAGCTCGCCCAGGTTCAACATGTATGGGAACGAGTTTGGAATGGGGAAAGCTGTAGCAGTTAGAAGTGGTTATGCCAACAAATTTGATGGGAAAGTGACATCATACCCAGGTCGTGAAGGAGGGGGAAGCATCGATTTGGAAGTGGGCCTTTTACCTCATATAATGAGCGCTCTGGAATCTGATGAGGAGTTTATGAATGTTGTCTCGGTTTCCAATCCCTTATGCTAG 1383 0.4396 MTTTPVVQRISECFVKPHGLTQVSNQICHLTQWDIVMLSMHYIQKGLLFKKPTPLVDQHDFIENLLEKLKHSLSLTLSHFYPLAGRFVTHKTQDPPSYAVSVDSKNSDGARFIYATLDMTISDILSPVDVPLVVQSLFDHHKAVNHDGHSMPLLSIQVTELVDGVFLGCSMNHAVGDGTSYWNFFNTWSQIFQSQAKGHETDVPISHQPILSRWFPNDCAPPINLPFKHHDEFISRFEAPLMRERVFHFSAESIAKLKAKANMESDTTKISSFQSLSALVWRSITRACSLPYEQRTSCRLTANNRTRMEPPLPQEYFGNSVSRVSAETTVGELLENNLGWAAWKLHLAVTNHNDRVVLQSLKEWLQSPLIYQLGQPMDPYVVLISSSPRFNMYGNEFGMGKAVAVRSGYANKFDGKVTSYPGREGGGSIDLEVGLLPHIMSALESDEEFMNVVSVSNPLC* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0356 460 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 453 - -
Gso4g0356 460 Pfam Transferase family 12 450 - -
Gso4g0356 460 Gene3D - 9 223 IPR023213 -
Gso4g0356 460 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 453 - -
Gso4g0356 460 Gene3D - 234 445 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0356 Gso-Chr4 3206147 3207858 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0356 69 444 Monolignol Biosynthesis Gene Families AT5G48930 28.030 3.66e-32 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0356 - - gmx:100795679 926.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0356 4 3206147 3207858 Gso4g0356 4 3206147 3207858 ECH