Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0355 ATGACATGCTTCAGTGTTCACAAAATAAATACTACACCTCTGCAGCACAAATCTAATTTGTGTGTGACCAGCATCTGCATTATGAGTACCCCTGTCGTTCGACGCATTTCCGAATGCTTCATCAAGCCACATCGTCCAATCGAAGAGTCTAACCAAATATGTTATTTAGCACCTTGGGATATTATTCTATTGTCTTATCACTATATCCAGAAGGGTCTACTCTTCAAGAAGCCTCCAACACTTGTCGATCAACAGAATTTCATAGAAAATCTGTTGGAGAAGCTCAAACACTCTCTTTCGTTCACCCTCTCCCATTTCTATCCTTTGGCTGGTCGCCTTGTCACCCACACAACCCAAGACCCTCCCTCGTATGCTTTTTTCGTTGATTGCAAAAACAGTGATGGAGCTAGATTCATCTATGCATCTTTGGACATGACCATATCTGACATACTCACCCCTGTTGACGTCCCACCCATTCTTCATTCATTCTTTGACCATCACAAAGCAGTCAACCATGATGGCCACACCATGCCCTTATTGTCCATCCAAGTCACTGAACTAGTGGATGCTGTTTTCATTGGTTGTTCCATGAACCACACTCTTGGTGATGGCACTTCCTACTGGAATTTCTTCAACACATGGTCTCAGATCTTTCAATCTCAAGCTCAAGGCCATGAATACAATGTTCCCATTTCACACCAACCCATTCTCAACCGTTGGTTTCCCAGTGATTGTGATCCGTCTGTTAATCTTCCTTTCAAACATCATGACGAGTTCATTTGCAACTTTGAAGCACCTTTTCTGAGGGAGAGAGTCTTCCACTTTTCTGCAGAGTCCATAGCAAAACTGAAAGCAAAAGCCAACTCAGAGTCCAATACCACAAAAATCTCTTCATTCCAGTCATTATCAGCACTTGTCTGGAGATCCATAACTCTCGCGCGCTCCGTGCCGTACGAGCAAAAAACAAGTTGCAAGATGGCTATAAACAATAGATCAAGAATGGAACCGCCTATGCCAGAAGAATACTTTGGAAACTTAGTTCAAGTAGTGAGTGCAGAAACGACAACAAGGGAATTGCTTGAGAATGATCTAGGATGGGCTGCATGGTTGTTACACGTGGCTGTCACAAACCATAATGACAAAGTGGTGCTGCAATCGCTCCAAGGATGGTTACAGTCTCCTTTTATCCCTCAAATTGGTCGATTGTTTGATCCGTACAGTGTGTTAATGGGAAGCTCGCCCAGGTTCAACAAGTATGGTTGTGAATTTGGAATGGGGAAAGCGGTGGCGATTAGAAGTGGGTATGCTAACAAGTTTGATGGGAAAGTGACATCATACCCAGGTCGTGAAGGAGGTGGAAGCATCGATTTGGAAGTGTGCCTTTTGCCACATATAATGAGAGCTCTGGAATCAGACAAGGAGTTTATGAATGCAGTTTCGGTGTCCAATCCCCTGTTCTAG 1461 0.4367 MTCFSVHKINTTPLQHKSNLCVTSICIMSTPVVRRISECFIKPHRPIEESNQICYLAPWDIILLSYHYIQKGLLFKKPPTLVDQQNFIENLLEKLKHSLSFTLSHFYPLAGRLVTHTTQDPPSYAFFVDCKNSDGARFIYASLDMTISDILTPVDVPPILHSFFDHHKAVNHDGHTMPLLSIQVTELVDAVFIGCSMNHTLGDGTSYWNFFNTWSQIFQSQAQGHEYNVPISHQPILNRWFPSDCDPSVNLPFKHHDEFICNFEAPFLRERVFHFSAESIAKLKAKANSESNTTKISSFQSLSALVWRSITLARSVPYEQKTSCKMAINNRSRMEPPMPEEYFGNLVQVVSAETTTRELLENDLGWAAWLLHVAVTNHNDKVVLQSLQGWLQSPFIPQIGRLFDPYSVLMGSSPRFNKYGCEFGMGKAVAIRSGYANKFDGKVTSYPGREGGGSIDLEVCLLPHIMRALESDKEFMNAVSVSNPLF* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0355 486 Gene3D - 263 471 IPR023213 -
Gso4g0355 486 Gene3D - 35 252 IPR023213 -
Gso4g0355 486 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 28 479 - -
Gso4g0355 486 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 28 479 - -
Gso4g0355 486 Pfam Transferase family 35 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0355 Gso-Chr4 3200880 3202721 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0355 60 470 Monolignol Biosynthesis Gene Families AT5G48930 26.218 8.14e-32 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0355 - - gmx:100792511 947.192