Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0354 ATGAGTGCCCCTGCCGTTCGACGCATTTCAGAATGTTTTGTTAAGCCCCAGCTCCCCAACCAAGTTTCAAACCAGATCTGCAATTTAACACATTGGGATATTGCTATGTTGTCTACCAACTATATCCAGAAGGGTCTACTCTTCAAGAAGCCTGCAACAACTCTTGTTGATCAACACCATTTCATGGAGAATCTGTTGGAGAAGCTCAAACACTCTCTTTCTCTCACCCTCTTCCATTTCTATCCTTTGGCTGGTCGCCTTGTCACCCACCAAACCCATGACCCTCCCTCTTATTCTGTTTCCGTTGATTGCAAAAACAGTGATGGAGCTAGATTCATTTATGCAACTTCGGACATCACTATATCTGACATACTCGCCCCCATTGACGTCCCACCCATTCTTCACTCCTTCTTTGACCATCACAAAGCAGTCAACCATGATGGCCACACCATGTCCCTTTTGTCCATCCAAGTCACTGAACTTGTGGATGCTGTTTTCATAGGTTGTTCCATGAACCACGTTGTTGGCGATGGCACTTCTTATTGGAATTTCTTCAATACATGGTCTCAGATCTTTCAATCTCAATCTCATGCTCTAGGCCATGAATATGATGTTCCCATTCACAATCGCTGGTTTCCAAAAGATTGCGCTCCACCAATCAATCTTCCTTTCATACATCATGATGAGATTATAAGCAGATATGAAGCACCCAAGCTGAGAGAGAGAATCTTCCACTTTTCAGCAGAGTCTATTGCAAAACTGAAAGCAAAGGCAAACTCGGAGTCCAATACCACCAAAATCTCTTCGTTCCAATCATTATCAGCGCTTGTTTGGAGATCCGTAACACGTGCACGCTCCCCACCGAACGACCAGAGAACAACTTGCAGGTTGGCAGCAAACAATCGATCAAGAATGGAACCGCCTCTGCCTCAGGAATACTTTGGAAACTCAGTTCATGTAGTGAGTGCAGAAACGACGACAGGGGAATTGCTTGAGAATGGTATAGGATGGGCTGCATGGAAGTTGCACATGGCTGTTGCAAACTATAACAATGGAGTGGTGCTGCAATCTCTGAAGGTGTGGTTAGAGTCTCCTTTCGTAATTCAAATGGGTCGTTTCTTTGACCCCTACTGTGTGATGATGGGTAGCTCGCCCAGGTTCAACGTGTATGGAAATGAATTTGGAATGGGAAAAGCGGTGGCGGCAAGAAGTGGTTATGCCAACAAGTTTGAGGGGAAAGTGACATCATACCCAGGCCGTGAAGGAGGTGGAAGCATTGATTTGGAAGTGTGCCTTTCACCAGAAAATATGACCGCGCTGGAATCAGATGAAGAGTTCATGAATGCTGTTTCTAAGTCCAATCCTTTGTACGAGTTGACTAATGTGGCTTGTCCTGGACCGTCTTTCTAA 1410 0.4518 MSAPAVRRISECFVKPQLPNQVSNQICNLTHWDIAMLSTNYIQKGLLFKKPATTLVDQHHFMENLLEKLKHSLSLTLFHFYPLAGRLVTHQTHDPPSYSVSVDCKNSDGARFIYATSDITISDILAPIDVPPILHSFFDHHKAVNHDGHTMSLLSIQVTELVDAVFIGCSMNHVVGDGTSYWNFFNTWSQIFQSQSHALGHEYDVPIHNRWFPKDCAPPINLPFIHHDEIISRYEAPKLRERIFHFSAESIAKLKAKANSESNTTKISSFQSLSALVWRSVTRARSPPNDQRTTCRLAANNRSRMEPPLPQEYFGNSVHVVSAETTTGELLENGIGWAAWKLHMAVANYNNGVVLQSLKVWLESPFVIQMGRFFDPYCVMMGSSPRFNVYGNEFGMGKAVAARSGYANKFEGKVTSYPGREGGGSIDLEVCLSPENMTALESDEEFMNAVSKSNPLYELTNVACPGPSF* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0354 469 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 450 - -
Gso4g0354 469 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 450 - -
Gso4g0354 469 Gene3D - 230 442 IPR023213 -
Gso4g0354 469 Pfam Transferase family 9 447 - -
Gso4g0354 469 Gene3D - 8 220 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0354 Gso-Chr4 3199117 3200735 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0354 67 441 Monolignol Biosynthesis Gene Families AT5G48930 28.788 4.00e-36 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0354 - - gmx:100789881 969.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0354 4 3199117 3200735 Gso4g0354 4 3199117 3200735 ECH