Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0353 ATGATGAATTCTCGTGTCGTTCGAAGCGTTTCAGAATGTTTTATCAAACCGTTGGGCCAAGCTAAAGAGTCAAACCTAATATGTCATTTAACACCATGGGATATTGCTATGATGTCTTTGCACTACATCCAGAAAGGTCTACTCTTCAAGAAGCCTGCAACACTTGTTGATCCACAAGATTTCATGGAGAATCTGTTAGAGAAGCTGAAACACTCTCTTTCTCTCACCCTCTTCCATTTCTATCCTTTGGCAGGCCAACTTGTCACCCAAAAAACCCAAGACCCTCCCTCTTATACTATTTTTGTCGATTGCAACAACACTAGTGGAGCCAGATTCATCTATGCAACTTTGGATATCACTATATCTGACATACTCTCCCCAGTTGATGTCCCACCCATTGTTCACTCATTCTTTGACCATCACAAAGCAGTCAACCATGATGGCCACACCATGCCACTGTTGTCCATCCAAGTCACTGAACTATTGGATGGTGTTTTCATAGGCTGTTCCATGAACCATACCATAGGTGATGGCACTTCTTATTGGAATTTCTTTAACACATGGTCTGAGATCTTTTTTCAAACTCAAGCTCAAGGGCTTGAATATGATGCTACTGTTCCCATTTCACGCCACCCTATTCATAATAGGTGGTTTCCAGATGGTTGTGGTCCATTAATCAATCTTCCCTTCAAACATGAGGACGAGTTTATTGACAGATTTGAATCACCAAAGCTGAGAGTGAGAATCTTCCACTTTTCAGCAGAGTCTATTGCAAAGCTGAAAGCAAGGGCTAACTCTGAGTCCAAATCCAAAACCAGCGAAATCTCTTCGTTCCAATCCTTATCAGCGCATGTTTGGAGATCCGTAACACGAGCACGGAAGCTGCCAAATGATGAGATAACAAGTTGCAAATTGGCCATAAGCAATCGATCAAGATTGGAACCGCCTCTTCCACATGAGTACTTTGGAAACGCAGTTGATGTGGTGAGCACTGCAGGGTTCACGGCAGGGGAATTGCTTGAGAAGGATCTAGGATGGGCAGCATGGAAGGTGCACGTGGCTGTTGCGAACCAAAACGACAAAGCGGTGAGACAAAAGCTCAAAGAGTGGTTGAAGCTTCCTGTGGTGTACCAACTTGGTGTGCACTTTGATCCTTGTACTGTGACCATGTCGAGTTCCCCGAGGTTCAACATGTATGGGAATGAATTTGGGATGGGGAAAGCGATTGCAGTTCTGAGTGGATATGCCAACAAAAATGATGGGAACGTGACAGCATACCAAGGATATGAAGGAGAGGGAAGCATAGATTTGGAAATTTGCCTTTCGCCTGATGCAGTGAGCGCGCTGGAATCAGATGAGGAGTTTATGGAAGCTGCTTCTGTGGCCAATTTCCTACACTAG 1401 0.4433 MMNSRVVRSVSECFIKPLGQAKESNLICHLTPWDIAMMSLHYIQKGLLFKKPATLVDPQDFMENLLEKLKHSLSLTLFHFYPLAGQLVTQKTQDPPSYTIFVDCNNTSGARFIYATLDITISDILSPVDVPPIVHSFFDHHKAVNHDGHTMPLLSIQVTELLDGVFIGCSMNHTIGDGTSYWNFFNTWSEIFFQTQAQGLEYDATVPISRHPIHNRWFPDGCGPLINLPFKHEDEFIDRFESPKLRVRIFHFSAESIAKLKARANSESKSKTSEISSFQSLSAHVWRSVTRARKLPNDEITSCKLAISNRSRLEPPLPHEYFGNAVDVVSTAGFTAGELLEKDLGWAAWKVHVAVANQNDKAVRQKLKEWLKLPVVYQLGVHFDPCTVTMSSSPRFNMYGNEFGMGKAIAVLSGYANKNDGNVTAYQGYEGEGSIDLEICLSPDAVSALESDEEFMEAASVANFLH* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0353 466 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 459 - -
Gso4g0353 466 Gene3D - 8 223 IPR023213 -
Gso4g0353 466 Gene3D - 233 451 IPR023213 -
Gso4g0353 466 Pfam Transferase family 14 456 - -
Gso4g0353 466 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0353 Gso-Chr4 3192100 3194122 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0353 67 450 Monolignol Biosynthesis Gene Families AT5G48930 30.073 2.74e-35 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0353 - - gmx:100788297 948.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0353 4 3192100 3194122 Gso4g0353 4 3192100 3194122 ECH