Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0319 ATGGATGCCACTAGAATTTTGGCACAAGGAGTGTTTGTGTTCCTTGTGATAACGTATGTGGGCGCGGAGAGAGAGCCCAGAACCATTTTGGTTGGAGACTCTCAAGGCTGGCAAGCCGGCACTAACTACACCCAATGGGCCATCCAAAATAGCCCCTTCCACATAAATGACACACTTGTGTTCAAGTATCCAGGGAACTCCACGACGCTGGCTCAGAGTGTGTACTTACTACCAAACCAGTGGAGCTACATAACGTGCGAATTCAGAGGGGCAAAGCTGTTGGGGAACGCAACTGAGGGTGATGGTGAGGGCTTTAAGGTTGAACTGAATCAGTTGACACCTTATTACTTTGCCTCTGCAGAAGGCAACTTTTATGATTGCATTGCTGGTCTCTCCAAGTTCATTGCCGTGCCATCAACAAGCTCTGGCTCCTCTTAG 438 0.4886 MDATRILAQGVFVFLVITYVGAEREPRTILVGDSQGWQAGTNYTQWAIQNSPFHINDTLVFKYPGNSTTLAQSVYLLPNQWSYITCEFRGAKLLGNATEGDGEGFKVELNQLTPYYFASAEGNFYDCIAGLSKFIAVPSTSSGSS* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0319 145 SUPERFAMILY Cupredoxins 27 137 IPR008972 -
Gso4g0319 145 Gene3D - 26 139 IPR008972 -
Gso4g0319 145 PANTHER GLYCINE-RICH PROTEIN-LIKE 1 141 - -
Gso4g0319 145 Pfam Plastocyanin-like domain 37 127 IPR003245 GO:0009055
Gso4g0319 145 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 1 141 - -
Gso4g0319 145 ProSiteProfiles Phytocyanin domain profile. 27 140 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0319 Gso-Chr4 2883055 2884292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0319 6 119 Phytocyanin Superfamily AT3G01070 32.174 1.44e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0319 - - gmx:100781181 299.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0319 4 2883055 2884292 Gso4g0319 4 2883055 2884292 ECH
Gso4g0319 4 2883055 2884292 Gso6g0303 6 2812965 2814097 GST