Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0311 ATGGATTCCTCTTTGCAATTAACTATCATAGCCATATTGGTGTCCTTGTTAGTGTTTCTCTGGCACACTAAGAGAAATAGAGGAGGTAGCAAGAACAAGAGTAAAGAGGCTCCTATCCCAGCTGGTGCATGGCCACTAATTGGTCACCTCCACCTTCTGGGTGGCGATGATCAACTTCTCTACCGAACACTTGGAACAATGGCTGACCAATATGGACCAGCATTCAACATCTGGCTCGGCACTCGCCGCGCATTTGTGGTGAGTAGCTGGGAAGTGGCAAAAGAATGTTTCACATCCAATGACAAGGCACTTGCCTCACGCCCCACTACGGTTGCCGCAAAGCACATGGGCTACAACTACGCTGTGTTTGGTTTTGCTCCTTATAGTCCCTTCTGGCGCGAGATGAGAAAGATTGCAACTCTTGAACTTCTCTCCAACCGCAGGCTCGAAATGCTCAAACATGTGATGGTGTCCGAACTCAACATGGTGATGAGGGATTTGTACAACTCTTGGGTCCAAAATAGGTCTCGGCCTGTGCTGGTTGAACTGAACCGCTGGTTGGAGGATTTGACTCTGAACATGGTGGTTAGAATGGTGGCGGGGAAACGCTACTTTGGTGCCTCGGCTAGCTGTGATAATGATGATGAAGCGAGGAGGTGCCAGAAGGCTATTAATCAGTTTTTTCATCTGATTGGGATTTTTGTGGTTTCGGACGCTCTTCCGTTTTTGCGTTGGTTCGATGTGCAGGGGCATGAGAGGGCAATGAAGAAGACTGCCAAGGAGTTGGATGCCATACTTGAAGGGTGGCTAAAGGAGCACCGTGAGCAAAGAGTTGATGGTGAAATTAAGGCAGAGGGTGAACAGGATTTCATTGATATCATGCTGTCGCTTCAGAAGGGTGGTCACCTATCAAATTTCCAATATGATTCGGATACCAGCATCAAATCCACATGCCTGGCTCTTATACTTGGTGGAAGTGATACCACAGCTGGCACGGTTACTTGGGCCATCTCATTACTGCTCAACAATCGCCAAGCATTAAAAAAGGCGCAAGAAGAATTGGACCTGAATGTTGGCATGGAACGGCAAGTTGAGGAGTCAGATATTAGAAACCTTGCATATGTTCAAGCAATTATCAAGGAAACCTTGCGGCTATACCCAGCTGGTCCCCTCCTAGGACCAAGAGAGGCCCAAGAAGATTGCAATGTTGCTGGCTACCATGTCCCTGCTGGGACCCGCTTGGTGGTTAACCTGTGGAAGATTCATAGGGATCCAAGGGTGTGGCAGGAGCCTTCTGCTTTTAGACCCGAGAGATTTCTCACAAGTGATGCTGTTGATGTGAGAGGCCAAAACTTTGAACTCATTCCCTTTGGCTCTGGTAGAAGGTCATGCCCTGGCATGTCCTTTGCACTCCAAGTTCTTCACTTGACACTGGCTCGTCTGCTTCATGCATTTGAATTCGCTACCCCATCAGATCAACCAGTTGACATGACTGAGAGCCCTGGTTTGACAATTCCTAAGGCAACTCCTTTGGAGGTTCTTCTTACTCCACGCCTTCCAGCCAAATTATATGCCTGCTAA 1581 0.4813 MDSSLQLTIIAILVSLLVFLWHTKRNRGGSKNKSKEAPIPAGAWPLIGHLHLLGGDDQLLYRTLGTMADQYGPAFNIWLGTRRAFVVSSWEVAKECFTSNDKALASRPTTVAAKHMGYNYAVFGFAPYSPFWREMRKIATLELLSNRRLEMLKHVMVSELNMVMRDLYNSWVQNRSRPVLVELNRWLEDLTLNMVVRMVAGKRYFGASASCDNDDEARRCQKAINQFFHLIGIFVVSDALPFLRWFDVQGHERAMKKTAKELDAILEGWLKEHREQRVDGEIKAEGEQDFIDIMLSLQKGGHLSNFQYDSDTSIKSTCLALILGGSDTTAGTVTWAISLLLNNRQALKKAQEELDLNVGMERQVEESDIRNLAYVQAIIKETLRLYPAGPLLGPREAQEDCNVAGYHVPAGTRLVVNLWKIHRDPRVWQEPSAFRPERFLTSDAVDVRGQNFELIPFGSGRRSCPGMSFALQVLHLTLARLLHAFEFATPSDQPVDMTESPGLTIPKATPLEVLLTPRLPAKLYAC* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0311 526 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g0311 526 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g0311 526 PRINTS E-class P450 group I signature 190 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g0311 526 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g0311 526 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g0311 526 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g0311 526 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g0311 526 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g0311 526 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g0311 526 PANTHER CYTOCHROME P450 CYP82D47-LIKE 9 521 - -
Gso4g0311 526 SUPERFAMILY Cytochrome P450 41 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g0311 526 Pfam Cytochrome P450 41 507 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g0311 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
Gso4g0311 526 PANTHER STEROID 21-HYDROXYLASE-RELATED 9 521 - -
Gso4g0311 526 Gene3D Cytochrome P450 27 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g0311 526 PRINTS P450 superfamily signature 324 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g0311 526 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g0311 526 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g0311 526 PRINTS P450 superfamily signature 464 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0311 Gso-Chr4 2809105 2811170 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0311 1 524 Cytochrome P450 AT4G31940 66.730 0.0 736
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0311 K23136 - gmx:100811993 1050.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0311 4 2809105 2811170 Gso4g0311 4 2809105 2811170 ECH