Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0310 ATGGGTCTCACGATTCAGTACCTGGAGGCATCAGTTGCCGCAATTATTGGCATAATCTTAGTTTCTTACTTCATCAAAAGGGCTACAGCAGGTTCTGCCCGCAAGCCACCGGCAGCAGGCGGTGGCTGGCCTTTGATCGGTCATCTTCACCTCTTAGGTGGTTCCACTCAGCCACCTTACATAACCTTAGGATCCTTGGCAGACAAGTATGGCCCAATATTCAGCATGAGAATTGGTGTGCATCATGCTGTTGTGGTGAGCTCTTGGGAGTTAGCAAAAGAGTGTTTCACCACTCTTGACGTCGTTATCTCTTCTCGTCCAAAATTCACCGCTGCAAAAATCTTGGGATACAACTATGCTAATTTTGGGTTCACCCCTTACGGAGACTTCTGGCGTGAGATGCGCAAGATAGCTGCTTCAGAGTTGCTTTCCACTGCCCGCTTTGAACTTCTTCAACGTATCAGAGACTCCGAGATGCAGATCTCGTTGAAAGAATTATACAGAACATGGGTGGACAAAAGAGGCGTGTCAGATGATTTGTTGGTGGAGATGAAGCAGTGGTTTGGAGACGTGAATCTGAACGTCATTCTCAGGATGATTTCGGGGAAGCGATACTCCGCTAAAAGTGAAGATGATCTGCAACAAGTAAGGAGAATTCGGAGGGTTTTCAGAGAGTTCTTTCGGTTGACAGGGTTGTTTGTGGTTGGGGACGCAATTCCCTTTCTTGGGTGGCTTGATTTGGGAGGGGAAGTGAAGGAGATGAAAAAGACGGCTATAGAAATGGATAACATCGTTTCTGAATGGCTAGAAGAACATAAGCAGCAGATAACAGATTCAGGTGACACCAAAACAGAACAAGACTTCATTGATGTCTTGCTCTTCGTCCTTAAAGGCGTCGACCTTGCCGGTTATGATTTTGACACTGTCATTAAAGCCACATGCACGATGCTGATTGCCGGAGCAACTGATACTACTGCAGTTACCATGACATGGGCACTGTCATTGTTGCTGAATAATCACCATGCTTTGAAGAAAGTAAAAGATGAATTGGATGAGCACGTGGGCAAAGAAAGATTAGTGAATGAATCTGACATTAACAAATTAGTTTACCTTCAAGCTGTGGTTAAAGAGACACTGCGATTGTATCCAGCTGGGCCATTCTCGGGTCCGCGTGAATTTACAGAAAACTGTACTTTAGGTGGTTACAAAATAGAAGCAGGTACTCGATTTATGTTGAATATTTGGAAATTGCATAGAGATCCTCGTGTATGGTCAAATCCATTAGAGTTTCAGCCAGAAAGGTTCTTGAACACCCATAAGAATGTTGATGTGAAGGGTCAGCATTTTGAGCTCCTTCCCTTTGGTGGTGGAAGAAGATCGTGCCCTGGCATATCATTTGGCCTTCAAATGTCACACTTGGCATTAGCTTCTTTTTTGCAGGCATTTGAAATCACAACTCCATCCAATGCTCAAGTTGATATGAGCGCCACATTTGGACTCACAAATATGAAAACTACCCCGCTTGAGGTTTTAGTCAGACCCGTTTTATCACATCAGCTACTCTTTGTCGATGAAGCTTAG 1581 0.4447 MGLTIQYLEASVAAIIGIILVSYFIKRATAGSARKPPAAGGGWPLIGHLHLLGGSTQPPYITLGSLADKYGPIFSMRIGVHHAVVVSSWELAKECFTTLDVVISSRPKFTAAKILGYNYANFGFTPYGDFWREMRKIAASELLSTARFELLQRIRDSEMQISLKELYRTWVDKRGVSDDLLVEMKQWFGDVNLNVILRMISGKRYSAKSEDDLQQVRRIRRVFREFFRLTGLFVVGDAIPFLGWLDLGGEVKEMKKTAIEMDNIVSEWLEEHKQQITDSGDTKTEQDFIDVLLFVLKGVDLAGYDFDTVIKATCTMLIAGATDTTAVTMTWALSLLLNNHHALKKVKDELDEHVGKERLVNESDINKLVYLQAVVKETLRLYPAGPFSGPREFTENCTLGGYKIEAGTRFMLNIWKLHRDPRVWSNPLEFQPERFLNTHKNVDVKGQHFELLPFGGGRRSCPGISFGLQMSHLALASFLQAFEITTPSNAQVDMSATFGLTNMKTTPLEVLVRPVLSHQLLFVDEA* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0310 526 PANTHER CYTOCHROME P450 FAMILY PROTEIN 12 520 - -
Gso4g0310 526 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g0310 526 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g0310 526 PRINTS E-class P450 group I signature 191 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g0310 526 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g0310 526 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g0310 526 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g0310 526 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g0310 526 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g0310 526 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g0310 526 Gene3D Cytochrome P450 22 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g0310 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
Gso4g0310 526 Pfam Cytochrome P450 40 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g0310 526 PANTHER CYTOCHROME P450 82C3-RELATED 12 520 - -
Gso4g0310 526 SUPERFAMILY Cytochrome P450 42 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g0310 526 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g0310 526 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso4g0310 526 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0310 Gso-Chr4 2805930 2808049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0310 37 521 Cytochrome P450 AT4G31940 50.813 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0310 - - gmx:100810391 1033.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0310 4 2805930 2808049 Gso6g0293 6 2728691 2732239 GST